fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019269 SSEDEMDLRRGPWTVDE in 19/325 AT3G06490.1 1st_not 0.570454545 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48000.1     MNISRTEFANCKTLINHKEEVEEVEKKMEIEIRRGPWTVEEDMKLVSYISLHGEGRWNSL
gm019269_Glyma0 MDGKGARSSN--TLLSSED---------EMDLRRGPWTVDEDLTLINYVATHGEGRWNTL
                *: . :. :*  **:. ::         *:::*******:**:.*:.*:: *******:*

AT1G48000.1     SRSAGLNRTGKSCRLRWLNYLRPDIRRGDISLQEQFIILELHSRWGNRWSKIAQHLPGRT
gm019269_Glyma0 ALSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHSRWGNRWSKIAQYLPGRT
                : ****:*****************:***:*:*:**::*****************:*****

AT1G48000.1     DNEIKNYWRTRVQKHAKLLKCDVNSKQFKDTIKHLWMPRLIERIAATQSVQFTS------
gm019269_Glyma0 DNEIKNYWRTRVQKHAKQLKCDVNSKQFKDTMRYIWMPRLVERIQATAAASATTTVTATT
                ***************** *************::::*****:*** ** :.. *:      

AT1G48000.1     --------------------NH------------------------YSPENSSVA-----
gm019269_Glyma0 ATNNAYTYGSNLNNNKFEVHDHKGKMGLTDPSVMNNDLVGSHVTQSYTPENSSTGASSSD
                                    :*                        *:*****..     

AT1G48000.1     ----------------TATSSTSSSEAVRSSFYGGDQV------------------EFGT
gm019269_Glyma0 SFGTQVSAISDLTEYYTVTVSGNNNNTNSADYYQPSQISYSDSCITSPSGLFPQGLDFQS
                                *.* * ...::  :.:*  .*:                  :* :

AT1G48000.1     LD-----HMTNGGYWFNGGDTFETLCSFDELNKWLIQ---
gm019269_Glyma0 MDPNTPWNMQSG----DSSDSFWNVESMLFLEQQLMNDNM
                :*     :* .*    :..*:* .: *:  *:: *::
BoxShade v3.31 C (beta, 970507) Output
AT1G48000.1     M N I S R T E F A N C K T L I N H K E E V E E V E K K M E I E I R R G P W T V E E D M K L V S Y I S L H G E G R W N S L
gm019269_Glyma0    M D G K G A R S S N - - T L L S S E D - - - - - - - - - E M D L R R G P W T V D E D L T L I N Y V A T H G E G R W N T L
 
AT1G48000.1     S R S A G L N R T G K S C R L R W L N Y L R P D I R R G D I S L Q E Q F I I L E L H S R W G N R W S K I A Q H L P G R T
gm019269_Glyma0    A L S A G L K R T G K S C R L R W L N Y L R P D V R R G N I T L E E Q L L I L E L H S R W G N R W S K I A Q Y L P G R T
 
AT1G48000.1     D N E I K N Y W R T R V Q K H A K L L K C D V N S K Q F K D T I K H L W M P R L I E R I A A T Q S V Q F T S - - - - - -
gm019269_Glyma0    D N E I K N Y W R T R V Q K H A K Q L K C D V N S K Q F K D T M R Y I W M P R L V E R I Q A T A A A S A T T T V T A T T
 
AT1G48000.1     - - - - - - - - - - - - - - - - - - - - N H - - - - - - - - - - - - - - - - - - - - - - - - Y S P E N S S V A - - - - -
gm019269_Glyma0    A T N N A Y T Y G S N L N N N K F E V H D H K G K M G L T D P S V M N N D L V G S H V T Q S Y T P E N S S T G A S S S D
 
AT1G48000.1     - - - - - - - - - - - - - - - - T A T S S T S S S E A V R S S F Y G G D Q V - - - - - - - - - - - - - - - - - - E F G T
gm019269_Glyma0    S F G T Q V S A I S D L T E Y Y T V T V S G N N N N T N S A D Y Y Q P S Q I S Y S D S C I T S P S G L F P Q G L D F Q S
 
AT1G48000.1     L D - - - - - H M T N G G Y W F N G G D T F E T L C S F D E L N K W L I Q - - -
gm019269_Glyma0    M D P N T P W N M Q S G - - - - D S S D S F W N V E S M L F L E Q Q L M N D N M
 
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