fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48195.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023832 VGVWWSLQLALALRGL in 70/500 AT3G06410.1 1st_not 0.6 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48195.1     ------------------------------------------------------------
pp023832_Pp1s10 MAMQGQEGVDGGQGPYPERPGEPDCVYYMRTGLCGFGMTCRYNHPPNRKLVRFLVHVECG
                                                                            

AT1G48195.1     ------------------------------------------------------------
pp023832_Pp1s10 VYGCVGVWWSLQLALALRGLRCEGGGRGQGEAQKRNSVGVVGGWSLAGAAAATRGKGEYP
                                                                            

AT1G48195.1     ------------------------------------------------------------
pp023832_Pp1s10 ERVGHPECQYYLKTGTCKFGATCKYHHPREKAGSTGRVHLNVLGLPLRLGEKECAYYMRT
                                                                            

AT1G48195.1     ------------------------------------------------------------
pp023832_Pp1s10 GSCKYGVTCKFHHPQPATVGGMVPLPFGSGGGPSSPAPQHYPPGGVPSWPLTRSPFPLPR
                                                                            

AT1G48195.1     -----------------MS-----------------------------------------
pp023832_Pp1s10 MQAPSSYGTMMPLQQGIMSMAGWNYQGPVGPAEGHQQGYVFGGAPQGEHVSGYGPYMQGS
                                 **                                         

AT1G48195.1     -----------------EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQC
pp023832_Pp1s10 SAVGLPAHQATQAVGGQETVFPERPGQPECQYYMKTGDCKFGSTCRYHHPKDRATPSPTC
                                 *  ******:***.**::**:* : ..*:*****: :...* *

AT1G48195.1     TLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH--------------FT---------
pp023832_Pp1s10 HLSPMGLPLRPGNPPCSFYSRYGICKFGPTCKFDHPLGGSLTYSPSAGSLTDLPVAPYPV
                 *.  *******:. *..***:***: ********              :*         

AT1G48195.1     ------------------------------------------------------------
pp023832_Pp1s10 GSSPMNLAPSGYSEVPVERQDAVEGGGYGEDGSSGGHHRVGRGNSEAATASPPTVGEGGG
                                                                            

AT1G48195.1     --------------------
pp023832_Pp1s10 GVGGSGSGSGSTQAESVSKS
BoxShade v3.31 C (beta, 970507) Output
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    M A M Q G Q E G V D G G Q G P Y P E R P G E P D C V Y Y M R T G L C G F G M T C R Y N H P P N R K L V R F L V H V E C G
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    V Y G C V G V W W S L Q L A L A L R G L R C E G G G R G Q G E A Q K R N S V G V V G G W S L A G A A A A T R G K G E Y P
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    E R V G H P E C Q Y Y L K T G T C K F G A T C K Y H H P R E K A G S T G R V H L N V L G L P L R L G E K E C A Y Y M R T
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    G S C K Y G V T C K F H H P Q P A T V G G M V P L P F G S G G G P S S P A P Q H Y P P G G V P S W P L T R S P F P L P R
 
AT1G48195.1     - - - - - - - - - - - - - - - - - M S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    M Q A P S S Y G T M M P L Q Q G I M S M A G W N Y Q G P V G P A E G H Q Q G Y V F G G A P Q G E H V S G Y G P Y M Q G S
 
AT1G48195.1     - - - - - - - - - - - - - - - - - E E K F P E R P G E P E C S Y Y L R T G N C Y L K Q N C K Y H H P K N I T P S E P Q C
pp023832_Pp1s10    S A V G L P A H Q A T Q A V G G Q E T V F P E R P G Q P E C Q Y Y M K T G D C K F G S T C R Y H H P K D R A T P S P T C
 
AT1G48195.1     T L N D K G L P L R P G Q A I C P H Y S R F G I C R S G P T C K F D H - - - - - - - - - - - - - - F T - - - - - - - - -
pp023832_Pp1s10    H L S P M G L P L R P G N P P C S F Y S R Y G I C K F G P T C K F D H P L G G S L T Y S P S A G S L T D L P V A P Y P V
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    G S S P M N L A P S G Y S E V P V E R Q D A V E G G G Y G E D G S S G G H H R V G R G N S E A A T A S P P T V G E G G G
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - -
pp023832_Pp1s10    G V G G S G S G S G S T Q A E S V S K S
 
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