fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48195.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023862 not found in 477aa AT3G48440.1 1st_not 0.663157894 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48195.1     ------------------------------------------------------------
pt023862_POPTR_ MDQQIESPIPIIHKEIPQLGFQSFSSSPRFPSTPSDPDQTALDDDNHLHQELQNQLDLKE
                                                                            

AT1G48195.1     ------------------------------------------------------------
pt023862_POPTR_ GSLNSNDSHEEEEEEEEEFKSDKKIEFFYESIEKVGDGGDDLENKNERSNDIENNNSSGY
                                                                            

AT1G48195.1     ------------------------------------------------------------
pt023862_POPTR_ HQYPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRRKNQVQLTVKEKTKEREEATEKPSLI
                                                                            

AT1G48195.1     ----------------------------------MSE-----------------------
pt023862_POPTR_ ECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPALELNFLGLPIRLGEKECEYFMR
                                                  **                        

AT1G48195.1     ------------------------------------------------------------
pt023862_POPTR_ NGSCKFGANCKYNHPDPTAVGGSDHPSTFLNGGSASLPVPSSSSVGSWSSPRALNDPTSF
                                                                            

AT1G48195.1     -----------------------------------------------------------E
pt023862_POPTR_ VPIMFSPNQGVPPQSPDWNGYQAPLYPPERSLHPPLSYALINIATESNVYAPQQQQIVVD
                                                                           :

AT1G48195.1     KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHY
pt023862_POPTR_ EFPERPGQPQCSFYMKFGDCKFKSNCKYHHPKNRISKSPPLTLSDKGLPLRPDQNICSHY
                :******:*:**:*:: *:* :*.*********  ...*  **.********.* **.**

AT1G48195.1     SRFGICRSGPTCKFDHFT---------------------------------------
pt023862_POPTR_ SRYGICKFGPSCKFDHSIQPASSIGSSDDQNTAFGNSVTQEAARMAESGNGSDTAVE
                **:***: **:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023862_POPTR_    M D Q Q I E S P I P I I H K E I P Q L G F Q S F S S S P R F P S T P S D P D Q T A L D D D N H L H Q E L Q N Q L D L K E
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023862_POPTR_    G S L N S N D S H E E E E E E E E E F K S D K K I E F F Y E S I E K V G D G G D D L E N K N E R S N D I E N N N S S G Y
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023862_POPTR_    H Q Y P V R P E A E D C A F Y M K T G T C K F G A N C K F N H P L R R K N Q V Q L T V K E K T K E R E E A T E K P S L I
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S E - - - - - - - - - - - - - - - - - - - - - - -
pt023862_POPTR_    E C K Y Y L K T G G C K Y G T A C R F N H S R A K Y S V P P V K I P M S P A L E L N F L G L P I R L G E K E C E Y F M R
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023862_POPTR_    N G S C K F G A N C K Y N H P D P T A V G G S D H P S T F L N G G S A S L P V P S S S S V G S W S S P R A L N D P T S F
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E
pt023862_POPTR_    V P I M F S P N Q G V P P Q S P D W N G Y Q A P L Y P P E R S L H P P L S Y A L I N I A T E S N V Y A P Q Q Q Q I V V D
 
AT1G48195.1     K F P E R P G E P E C S Y Y L R T G N C Y L K Q N C K Y H H P K N I T P S E P Q C T L N D K G L P L R P G Q A I C P H Y
pt023862_POPTR_    E F P E R P G Q P Q C S F Y M K F G D C K F K S N C K Y H H P K N R I S K S P P L T L S D K G L P L R P D Q N I C S H Y
 
AT1G48195.1     S R F G I C R S G P T C K F D H F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt023862_POPTR_    S R Y G I C K F G P S C K F D H S I Q P A S S I G S S D D Q N T A F G N S V T Q E A A R M A E S G N G S D T A V E
 
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