fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48195.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os040845 not found in 454aa AT3G02830.1 1st_not 0.584210526 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48195.1     ---------------------------------------------------------MSE
Os040845_Os12t0 MAAGAGAGGGGGEGDSNGGGTSPGGVSAAAPAIGPHHLGVAAAEEAMWQMTLGGGESMES
                                                                         *..

AT1G48195.1     EKFPERPGEPECSYYLRTGNC--------------------------------------Y
Os040845_Os12t0 TPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGEYPYRVGQPECQYY
                  :*** ***:****:*** *                                      *

AT1G48195.1     LKQ-------NCKYHHPK------------------------------------------
Os040845_Os12t0 LKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKF
                **        .**:***:                                          

AT1G48195.1     ------------------------------------------------------------
Os040845_Os12t0 HHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAVTNWTLSRSASFIASPRWPGHSGYAQ
                                                                            

AT1G48195.1     ------------------------------------------------------------
Os040845_Os12t0 VIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGG
                                                                            

AT1G48195.1     ------------NITPSE---------------------------------PQCTLNDKG
Os040845_Os12t0 SVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLG
                            ** *..                                 *:*:**. *

AT1G48195.1     LPLRPGQAICPHYSRFGICRSGPTCKFDHFT-----------------------------
Os040845_Os12t0 LPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRGDVSSMHYQLSPSPGHP
                ******:.:*..***:***: **.*****                               

AT1G48195.1     ----------------------------------
Os040845_Os12t0 GILLDGGSGRSHRVPQSDSQQIPSGDGNAEREAS
BoxShade v3.31 C (beta, 970507) Output
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S E
Os040845_Os12t0    M A A G A G A G G G G G E G D S N G G G T S P G G V S A A A P A I G P H H L G V A A A E E A M W Q M T L G G G E S M E S
 
AT1G48195.1     E K F P E R P G E P E C S Y Y L R T G N C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y
Os040845_Os12t0    T P Y P E R I G E P D C S Y Y M R T G L C R F G M T C K F N H P P N R K L A V A A A R M N G E Y P Y R V G Q P E C Q Y Y
 
AT1G48195.1     L K Q - - - - - - - N C K Y H H P K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os040845_Os12t0    L K T G T C K F G A T C K F H H P R E K A A L A N R V Q L N V L G Y P M R P N E K E C A Y Y L R T G Q C K F A S T C K F
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os040845_Os12t0    H H P Q P S N T M V A V R N S M Y S P G Q S A T S P G Q H T Y P G A V T N W T L S R S A S F I A S P R W P G H S G Y A Q
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os040845_Os12t0    V I V P Q G L V Q V P G W N P Y A A Q M G S S S P D D Q Q R T P V T T Q Y Y G S R Q S E T G G M G D H G M Y Q S Y Q G G
 
AT1G48195.1     - - - - - - - - - - - - N I T P S E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P Q C T L N D K G
Os040845_Os12t0    S V P V G V Y T V Q G E N I F P E R P D Q P E C Q F Y M K T G D C K F G A V C K F H H P K E R L V P A P N C A L N S L G
 
AT1G48195.1     L P L R P G Q A I C P H Y S R F G I C R S G P T C K F D H F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os040845_Os12t0    L P L R P G E P V C T F Y S R Y G I C K F G P N C K F D H P M G T L M Y G S A T S P R G D V S S M H Y Q L S P S P G H P
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os040845_Os12t0    G I L L D G G S G R S H R V P Q S D S Q Q I P S G D G N A E R E A S
 
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