fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48195.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb012316 not found in 446aa AT3G02830.1 1st_not 0.552631578 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48195.1     ------------------------------------------------MSEEKFPERPGE
Sb012316_Sorbi1 MAAPSGGGGGGAGEGSSSAAAAATIGAHGVDQVAEAMWQMNLGETMAPMELGPYPERVGE
                                                                *.   :*** **

AT1G48195.1     PECSYYLRTGNC--------------------------------------YLKQ------
Sb012316_Sorbi1 PDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFG
                *:****:*** *                                      ***       

AT1G48195.1     -NCKYHHPK---------------------------------------------------
Sb012316_Sorbi1 ATCKFHHPREKAAMATRVQLNELGYPLRANEKECAYYLRTGQCKFGSTCKFHHPQPSTMM
                 .**:***:                                                   

AT1G48195.1     ------------------------------------------------------------
Sb012316_Sorbi1 VAVRGSVYSPGQSATSPGQHAYQGAVTSWPLSRSASFIASPRWPGHSSYAQVIVPPGLVQ
                                                                            

AT1G48195.1     ------------------------------------------------------------
Sb012316_Sorbi1 VPGWSPYTAQIGSSSSDDQQRTPGAAQYYTGSRQSGTAGIGDQGMFSSYQAGSVPVGLYA
                                                                            

AT1G48195.1     ----NITPSE---------------------------------PQCTLNDKGLPLRPGQA
Sb012316_Sorbi1 VQRENVFPERPDQPECQFYMKTGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEP
                    *: *..                                 *:*:*.  *******:.

AT1G48195.1     ICPHYSRFGICRSGPTCKFDHFT-------------------------------------
Sb012316_Sorbi1 ICSFYNRYGMCKFGPNCKFDHPMGSAMYGHASSPTSEAPTSLRMLAHVPSHPEVSPDSGS
                **..*.*:*:*: **.*****                                       

AT1G48195.1     --------------------------
Sb012316_Sorbi1 GRSRRIAHSDSQQIPSVERSTEREAS
BoxShade v3.31 C (beta, 970507) Output
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S E E K F P E R P G E
Sb012316_Sorbi1    M A A P S G G G G G G A G E G S S S A A A A A T I G A H G V D Q V A E A M W Q M N L G E T M A P M E L G P Y P E R V G E
 
AT1G48195.1     P E C S Y Y L R T G N C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y L K Q - - - - - -
Sb012316_Sorbi1    P D C S Y Y M R T G M C R F G M T C K F N H P A D R K L A V A A A R M K G E Y P Q R I G Q P E C Q Y Y L K T G T C K F G
 
AT1G48195.1     - N C K Y H H P K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb012316_Sorbi1    A T C K F H H P R E K A A M A T R V Q L N E L G Y P L R A N E K E C A Y Y L R T G Q C K F G S T C K F H H P Q P S T M M
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb012316_Sorbi1    V A V R G S V Y S P G Q S A T S P G Q H A Y Q G A V T S W P L S R S A S F I A S P R W P G H S S Y A Q V I V P P G L V Q
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb012316_Sorbi1    V P G W S P Y T A Q I G S S S S D D Q Q R T P G A A Q Y Y T G S R Q S G T A G I G D Q G M F S S Y Q A G S V P V G L Y A
 
AT1G48195.1     - - - - N I T P S E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P Q C T L N D K G L P L R P G Q A
Sb012316_Sorbi1    V Q R E N V F P E R P D Q P E C Q F Y M K T G D C K F G A V C K F H H P R E R I I P T P N C A L S P L G L P L R P G E P
 
AT1G48195.1     I C P H Y S R F G I C R S G P T C K F D H F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb012316_Sorbi1    I C S F Y N R Y G M C K F G P N C K F D H P M G S A M Y G H A S S P T S E A P T S L R M L A H V P S H P E V S P D S G S
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb012316_Sorbi1    G R S R R I A H S D S Q Q I P S V E R S T E R E A S
 
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