fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G48195.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011232 not found in 490aa AT3G48440.1 1st_not 0.689473684 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G48195.1     -----------------------------------------------------------M
gm011232_Glyma0 MEGSESDSVSLSISNGEEPQLGRPSSPAAPPEPSDLNHAAEEETLSGELQSKLDLKDVDE
                                                                            

AT1G48195.1     SEEK--------------------------------------------------------
gm011232_Glyma0 SEEKVSDFNDGGGVCDEETGKGDGDSKGWETNSWNEEVGVDVDVDGDGDGDGDDDVDGDV
                ****                                                        

AT1G48195.1     ------------------------------------------------------------
gm011232_Glyma0 DGDDEVEKKEGRNSGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEK
                                                                            

AT1G48195.1     ------------------------------------------------------------
gm011232_Glyma0 AGEREETTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPG
                                                                            

AT1G48195.1     ------------------------------------------------------------
gm011232_Glyma0 ERECPYYMRTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISLQGVSQTSVPSWS
                                                                            

AT1G48195.1     ------------------------------------------------------------
gm011232_Glyma0 SPRTLNEASPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERSIHPPSTFVMNNPAIDTNV
                                                                            

AT1G48195.1     ------------FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLP
gm011232_Glyma0 YMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLP
                            ***********::*:**:* :*.***:***** ..  * *.*.*****

AT1G48195.1     LRPGQAICPHYSRFGICRSGPTCKFDHFT-------------------------------
gm011232_Glyma0 LRPDQSVCSHYSRYGICKFGPACKFDHPINLQPVMIPGLEQQSYSNSASAGVAGIGGSTG
                ***.*::*.****:***: **:*****                                 

AT1G48195.1     ----------
gm011232_Glyma0 VTDATIQQSV
BoxShade v3.31 C (beta, 970507) Output
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M
gm011232_Glyma0    M E G S E S D S V S L S I S N G E E P Q L G R P S S P A A P P E P S D L N H A A E E E T L S G E L Q S K L D L K D V D E
 
AT1G48195.1     S E E K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011232_Glyma0    S E E K V S D F N D G G G V C D E E T G K G D G D S K G W E T N S W N E E V G V D V D V D G D G D G D G D D D V D G D V
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011232_Glyma0    D G D D E V E K K E G R N S G G T H H Y P L R P E A E D C A F Y M K T G N C K F G F N C K F N H P I K R K S Q A V K E K
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011232_Glyma0    A G E R E E T T E R S G M T E C K Y Y Q R S G G C K F G K S C K Y N H T R G K I S T A P A P L L E L N F L G L P I R P G
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011232_Glyma0    E R E C P Y Y M R T G S C K F G A N C K F N H P D P T A V G G G G G N P P S G Y G N G G S I S L Q G V S Q T S V P S W S
 
AT1G48195.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011232_Glyma0    S P R T L N E A S P F V P M M L S P T Q G V S T Q S S D W N G Y Q A S V Y L P E R S I H P P S T F V M N N P A I D T N V
 
AT1G48195.1     - - - - - - - - - - - - F P E R P G E P E C S Y Y L R T G N C Y L K Q N C K Y H H P K N I T P S E P Q C T L N D K G L P
gm011232_Glyma0    Y M H H Q K Q M P V D E F P E R P G E P E C S F F L K T G D C K F K S N C K F H H P K N R V T R L P P C N L S D K G L P
 
AT1G48195.1     L R P G Q A I C P H Y S R F G I C R S G P T C K F D H F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm011232_Glyma0    L R P D Q S V C S H Y S R Y G I C K F G P A C K F D H P I N L Q P V M I P G L E Q Q S Y S N S A S A G V A G I G G S T G
 
AT1G48195.1     - - - - - - - - - -
gm011232_Glyma0    V T D A T I Q Q S V
 
0