fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025061 not found in 424aa AT1G49010.1 1st_1st 0.450216450 Ia
Gm046848 not found in 302aa AT1G49010.1 1st_1st 0.541125541 Ia
Pt023752 not found in 293aa AT1G49010.1 1st_1st 0.534632034 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G49010.1     MESVVA----TWSREEEKAFENAIALHCVEEE--ITEDQW-NKMSSMVPSKALEEVKKHY
Sb025061_Sorbi1 MTTLATAATAAWTREEDKAFENAVAAAAAPPADGTPDDGWFTALVASVPARTAEEVRRHY
pt023752_POPTR_ MASVGT-----WTRDEEKTFENAIAMHWIDED---SNEQW-EKIASMVPSKSLEELKLHY
gm046848_Glyma1 MSSSGT----IWSYEEEKAFENAIAMHWIEES---SKEQW-EKIASAVPSKSMEDVKQHY
                * :  :     *: :*:*:****:*          ..: *   : : **::: *::: **

AT1G49010.1     QILLEDVKAIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSG---SSEKKPN---
Sb025061_Sorbi1 EALVEDVAAIEAGRIPLPRY----------AG-EESSAATPE--GSGAAASAPK------
pt023752_POPTR_ KILVEDVCAIEAGNVPIPNY----------EG-EEAASSTKDLHGLSGTMTTVKKLNCGY
gm046848_Glyma1 QVLVEDVSAIEAGHISFPNY----------AASEEITSSNKDFHGSSKATSSDKRSNCNY
                : *:*** *** *.:.:*.*           .    :.:. :  . .   :: *      

AT1G49010.1     -PGTSGI---SSSN-GGRSG-----GSR-AEQERRKGIPWTEEEHRLFLLGLDKFGKGDW
Sb025061_Sorbi1 -DGGGGSGHRREERKSGGGGDAGKSCSK-AEQERRKGVPWTEEEHRLFLLGLDKFGKGDW
pt023752_POPTR_ GSGFVGLGHESSGH--GGKG-----ASR-SEQERKKGIPWTEEEHRLFLLGLDKFGKGDW
gm046848_Glyma1 GRGFSGLGHDSTTHSSGKGG-----LSRSSEQERRKGIPWTEEEHRLFLLGLEKFGKGDW
                  *  *       .  *  *      *: :****:**:**************:*******

AT1G49010.1     RSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITTVNN------QAPAVTG
Sb025061_Sorbi1 RSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVTAGEVAAAGAPIT--
pt023752_POPTR_ RSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSLNNGDVSSHQAPIT--
gm046848_Glyma1 RSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPIT--
                *******************************************::.        ** .  

AT1G49010.1     GGQQPQVVKHRPAQPQ----PQPQPQPQQHHP-PTMAGLGMYGGAPVGQPIIAPPDHM--
Sb025061_Sorbi1 GGPAAAGAM--PMGPA-GM--------KHHHPAP---PMGMYGHAPMGHPVA---GHMMA
pt023752_POPTR_ -GQQANTS---PAGPAPAMGPPVKHRTQAHM--P---GLAMY-GPPLGHPVAPPPGHM--
gm046848_Glyma1 -GQHSSTI---PSNTM-GVGQSLKHRVQGHIP-P---GLGMY-GTPVGHPVAAPPGHM--
                 *  .      *  .            : *   *    :.**  .*:*:*:    .**  

AT1G49010.1     GSAVGTPVMLPPPMGTHHHHHHHHLGVAPYAVP-AYPVPPLPQQHPAPSTMH-
Sb025061_Sorbi1 PAAVGTPVMFPP------GHH------SPYVVPVGYPA--------PPAKMHQ
pt023752_POPTR_ ASAVGTPVMLPP-----PGHHPH----PPYVVPVAYPT--------APPKTA-
gm046848_Glyma1 ASAVGTPVMLPP--GPHPHAHPH----PPYVLPLAYPM--------APPTMHQ
                 :*******:**        *      .**.:* .**         .*..
BoxShade v3.31 C (beta, 970507) Output
AT1G49010.1     M E S V V A - - - - T W S R E E E K A F E N A I A L H C V E E E - - I T E D Q W - N K M S S M V P S K A L E E V K K H Y
Sb025061_Sorbi1    M T T L A T A A T A A W T R E E D K A F E N A V A A A A A P P A D G T P D D G W F T A L V A S V P A R T A E E V R R H Y
pt023752_POPTR_    M A S V G T - - - - - W T R D E E K T F E N A I A M H W I D E D - - - S N E Q W - E K I A S M V P S K S L E E L K L H Y
gm046848_Glyma1    M S S S G T - - - - I W S Y E E E K A F E N A I A M H W I E E S - - - S K E Q W - E K I A S A V P S K S M E D V K Q H Y
 
AT1G49010.1     Q I L L E D V K A I E N G Q V P L P R Y H H R K G L I V D E A A A A A T S P A N R D S H S S G - - - S S E K K P N - - -
Sb025061_Sorbi1    E A L V E D V A A I E A G R I P L P R Y - - - - - - - - - - A G - E E S S A A T P E - - G S G A A A S A P K - - - - - -
pt023752_POPTR_    K I L V E D V C A I E A G N V P I P N Y - - - - - - - - - - E G - E E A A S S T K D L H G L S G T M T T V K K L N C G Y
gm046848_Glyma1    Q V L V E D V S A I E A G H I S F P N Y - - - - - - - - - - A A S E E I T S S N K D F H G S S K A T S S D K R S N C N Y
 
AT1G49010.1     - P G T S G I - - - S S S N - G G R S G - - - - - G S R - A E Q E R R K G I P W T E E E H R L F L L G L D K F G K G D W
Sb025061_Sorbi1    - D G G G G S G H R R E E R K S G G G G D A G K S C S K - A E Q E R R K G V P W T E E E H R L F L L G L D K F G K G D W
pt023752_POPTR_    G S G F V G L G H E S S G H - - G G K G - - - - - A S R - S E Q E R K K G I P W T E E E H R L F L L G L D K F G K G D W
gm046848_Glyma1    G R G F S G L G H D S T T H S S G K G G - - - - - L S R S S E Q E R R K G I P W T E E E H R L F L L G L E K F G K G D W
 
AT1G49010.1     R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T T V N N - - - - - - Q A P A V T G
Sb025061_Sorbi1    R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T S V T A G E V A A A G A P I T - -
pt023752_POPTR_    R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T S L N N G D V S S H Q A P I T - -
gm046848_Glyma1    R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T S V N N G D V A N N Q A P I T - -
 
AT1G49010.1     G G Q Q P Q V V K H R P A Q P Q - - - - P Q P Q P Q P Q Q H H P - P T M A G L G M Y G G A P V G Q P I I A P P D H M - -
Sb025061_Sorbi1    G G P A A A G A M - - P M G P A - G M - - - - - - - - K H H H P A P - - - P M G M Y G H A P M G H P V A - - - G H M M A
pt023752_POPTR_    - G Q Q A N T S - - - P A G P A P A M G P P V K H R T Q A H M - - P - - - G L A M Y - G P P L G H P V A P P P G H M - -
gm046848_Glyma1    - G Q H S S T I - - - P S N T M - G V G Q S L K H R V Q G H I P - P - - - G L G M Y - G T P V G H P V A A P P G H M - -
 
AT1G49010.1     G S A V G T P V M L P P P M G T H H H H H H H H L G V A P Y A V P - A Y P V P P L P Q Q H P A P S T M H -
Sb025061_Sorbi1    P A A V G T P V M F P P - - - - - - G H H - - - - - - S P Y V V P V G Y P A - - - - - - - - P P A K M H Q
pt023752_POPTR_    A S A V G T P V M L P P - - - - - P G H H P H - - - - P P Y V V P V A Y P T - - - - - - - - A P P K T A -
gm046848_Glyma1    A S A V G T P V M L P P - - G P H P H A H P H - - - - P P Y V L P L A Y P M - - - - - - - - A P P T M H Q
 
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