fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp014546 not found in 302aa AT5G08520.1 1st_not 0.415584415 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49010.1     ---MESVVAT-----WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKH
pp014546_Pp1s25 MAESQSSLTTASGSVWTREQDKEFEN--ALNNFDED-TPNRWEQIAAVVTGKDAAEVKRH
                    :* ::*     *:**::* ***  **: .:*: * ::*::::::*..*   ***:*

AT1G49010.1     YQILLEDVKAIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSG
pp014546_Pp1s25 YEILQEDVNLIDSGRVALPNY-SLSSLSLSEEGAASDSPGVKKGTSFSGQVSGPSANANG
                *:** ***: *:.*:*.**.*   ..* :.* .**: **. :.. * ... . *...:.*

AT1G49010.1     ISSSN-GGRSGGSR-AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPT
pp014546_Pp1s25 NGNAALGGKGMSSKSADQERRKGIPWSEEEHRLFLLGLAKFGKGDWRSISRNFVISRTPT
                 ..:  **:. .*: *:*********:*********** *********************

AT1G49010.1     QVASHAQKYFIRLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQP-
pp014546_Pp1s25 QVASHAQKYFIRLNSINKDKRRSSIHDITSVNNGDAAQQGQG---------PITGQPGPG
                ***************:*:*:*********:***  .*  * *         *   ** * 

AT1G49010.1     ----QPQPQQHHPPTMAGLGMYGGAP-VGQPIIAPPDHMGSAVGTPVMLPPPMGTHHHHH
pp014546_Pp1s25 SATGQPIPGGMQP------GMYPGQQMIGQP---------PAVGAPVMLPPP--------
                    ** *   :*      *** *   :***         .***:*******        

AT1G49010.1     HHHLGVAPYAVPAYPVPPLPQQHPAPST--------MH-
pp014546_Pp1s25 -GHVSYGPRGHLPRPVMPGQQMGMAPHMSYPMSQPGMHH
                  *:. .* .  . ** *  *   **          **
BoxShade v3.31 C (beta, 970507) Output
AT1G49010.1     - - - M E S V V A T - - - - - W S R E E E K A F E N A I A L H C V E E E I T E D Q W N K M S S M V P S K A L E E V K K H
pp014546_Pp1s25    M A E S Q S S L T T A S G S V W T R E Q D K E F E N - - A L N N F D E D - T P N R W E Q I A A V V T G K D A A E V K R H
 
AT1G49010.1     Y Q I L L E D V K A I E N G Q V P L P R Y H H R K G L I V D E A A A A A T S P A N R D S H S S G S S E K K P N P G T S G
pp014546_Pp1s25    Y E I L Q E D V N L I D S G R V A L P N Y - S L S S L S L S E E G A A S D S P G V K K G T S F S G Q V S G P S A N A N G
 
AT1G49010.1     I S S S N - G G R S G G S R - A E Q E R R K G I P W T E E E H R L F L L G L D K F G K G D W R S I S R N F V I S R T P T
pp014546_Pp1s25    N G N A A L G G K G M S S K S A D Q E R R K G I P W S E E E H R L F L L G L A K F G K G D W R S I S R N F V I S R T P T
 
AT1G49010.1     Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T T V N N Q A P A V T G G G Q Q P Q V V K H R P A Q P Q P Q P -
pp014546_Pp1s25    Q V A S H A Q K Y F I R L N S I N K D K R R S S I H D I T S V N N G D A A Q Q G Q G - - - - - - - - - P I T G Q P G P G
 
AT1G49010.1     - - - - Q P Q P Q Q H H P P T M A G L G M Y G G A P - V G Q P I I A P P D H M G S A V G T P V M L P P P M G T H H H H H
pp014546_Pp1s25    S A T G Q P I P G G M Q P - - - - - - G M Y P G Q Q M I G Q P - - - - - - - - - P A V G A P V M L P P P - - - - - - - -
 
AT1G49010.1     H H H L G V A P Y A V P A Y P V P P L P Q Q H P A P S T - - - - - - - - M H -
pp014546_Pp1s25    - G H V S Y G P R G H L P R P V M P G Q Q M G M A P H M S Y P M S Q P G M H H
 
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