fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030230 VTLSQGLQLKLVMHRS in 207/476 AT5G08520.1 not_not 0.422077922 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49010.1     -----------------------------------------------------------M
Sb030230_Sorbi1 HSSYLAAPPPLHFRSPPKPRNPTRGIPRGRRLLRVHPPRGVSSGSASMAVEEASSSGGGG
                                                                            

AT1G49010.1     ESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVK
Sb030230_Sorbi1 EEGCGAWTREQEKAFENAVATTMGGEEDGDARWEKLAEAVEGKTPEEVRRHYELLVEDVD
                *.  .:*:**:*******:*     **  : :*:*::. * .*: ***::**::*:***.

AT1G49010.1     AIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRS
Sb030230_Sorbi1 GIESGRVPLPTY-----------------------AADGAAEEGGGGGGGGKKGGGGGGT
                .**.*:**** *                        :.*::*:  . * .* ....** :

AT1G49010.1     GGSR-----AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHA
Sb030230_Sorbi1 HGDKGSAKSAEQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHA
                 *.:     *********.***:*********:*:*************************

AT1G49010.1     QKYFIRLNSMNRDRRRSSIHDITTVNN------QAPAVTG--GGQQPQVVKHRPAQPQPQ
Sb030230_Sorbi1 QKYFIRLNSMNRERRRSSIHDITSVNNGDASTAQGP-ITGQTNGQAAN-----PGKPSKQ
                ************:**********:***      *.* :**  .** .:     *.:*. *

AT1G49010.1     PQPQPQQHHPPTMAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVMLP---PPMGTHHHHHH
Sb030230_Sorbi1 -SPQP-ANTPPGVDAYGTTIGQPVGGPLV-------SAVGTPVTLPVSAPP----HLAYG
                 .***  : ** : . *   * *** *::       ******* **   **    *  : 

AT1G49010.1     HHLGVAPYAVPAYPV--PPLPQQHPAPSTMH-
Sb030230_Sorbi1 MHAPVPGAVVPGAPVNIAPMPYPMPPPSS-HG
                 *  *.  .**. **  .*:*   *.**: *
BoxShade v3.31 C (beta, 970507) Output
AT1G49010.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M
Sb030230_Sorbi1    H S S Y L A A P P P L H F R S P P K P R N P T R G I P R G R R L L R V H P P R G V S S G S A S M A V E E A S S S G G G G
 
AT1G49010.1     E S V V A T W S R E E E K A F E N A I A L H C V E E E I T E D Q W N K M S S M V P S K A L E E V K K H Y Q I L L E D V K
Sb030230_Sorbi1    E E G C G A W T R E Q E K A F E N A V A T T M G G E E D G D A R W E K L A E A V E G K T P E E V R R H Y E L L V E D V D
 
AT1G49010.1     A I E N G Q V P L P R Y H H R K G L I V D E A A A A A T S P A N R D S H S S G S S E K K P N P G T S G I S S S N G G R S
Sb030230_Sorbi1    G I E S G R V P L P T Y - - - - - - - - - - - - - - - - - - - - - - - A A D G A A E E G G G G G G G G K K G G G G G G T
 
AT1G49010.1     G G S R - - - - - A E Q E R R K G I P W T E E E H R L F L L G L D K F G K G D W R S I S R N F V I S R T P T Q V A S H A
Sb030230_Sorbi1    H G D K G S A K S A E Q E R R K G I A W T E D E H R L F L L G L E K Y G K G D W R S I S R N F V I S R T P T Q V A S H A
 
AT1G49010.1     Q K Y F I R L N S M N R D R R R S S I H D I T T V N N - - - - - - Q A P A V T G - - G G Q Q P Q V V K H R P A Q P Q P Q
Sb030230_Sorbi1    Q K Y F I R L N S M N R E R R R S S I H D I T S V N N G D A S T A Q G P - I T G Q T N G Q A A N - - - - - P G K P S K Q
 
AT1G49010.1     P Q P Q P Q Q H H P P T M A G L G M Y G G A P V G Q P I I A P P D H M G S A V G T P V M L P - - - P P M G T H H H H H H
Sb030230_Sorbi1    - S P Q P - A N T P P G V D A Y G T T I G Q P V G G P L V - - - - - - - S A V G T P V T L P V S A P P - - - - H L A Y G
 
AT1G49010.1     H H L G V A P Y A V P A Y P V - - P P L P Q Q H P A P S T M H -
Sb030230_Sorbi1    M H A P V P G A V V P G A P V N I A P M P Y P M P P P S S - H G
 
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