fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49010.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011625 not found in 307aa AT1G49010.1 not_1st 0.532467532 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49010.1     MESVVATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDV
gm011625_Glyma0 MSSSGTIWSYDEEKAFENAIAMHWIEES-SKEQWEKIASAVPSKSMEEVKQHYQVLVEDV
                *.*  : ** :**********:* :**. :::**:*::* ****::****:***:*:***

AT1G49010.1     KAIENGQVPLPRYHHRKGLIVDEAAAAATSPANRDSHSSG---SSEKKPN----PGTSGI
gm011625_Glyma0 SAIEAGHISFPNY-----------ASDETTSSNKDFHGSSKATSSDKRSNCNYGSGFSGL
                .*** *::.:*.*           *:  *:.:*:* *.*.   **:*:.*    .* **:

AT1G49010.1     ----SSSNGGRSGGSR-AEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
gm011625_Glyma0 GLDSTTHSSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRT
                    :: ..*:.* ** :******************************************

AT1G49010.1     PTQVASHAQKYFIRLNSMNRDRRRSSIHDITTVNN------QAPAVTGGGQQP-------
gm011625_Glyma0 PTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVASSQAP-ITGLHSSTISSNTMG
                *******************************:***      *** :**  ...       

AT1G49010.1     --QVVKHRPAQPQPQPQPQPQQHHPPTMAGLGMYGGAPVGQPIIAPPDHMGSAVGTPVML
gm011625_Glyma0 VGQSLKHR-----------VQGHIPP---GLGMY-GTPVGHPVAAPPGHMASAVGTPVML
                  * :***            * * **   ***** *:***:*: ***.**.*********

AT1G49010.1     PPPMGTH-HHHHHHHLGVAPYAVPAYPVPP--LPQQHP-APSTMH-
gm011625_Glyma0 PP--GPHPHPHPHHH---------AHPHPPYVLPLAYPMAPPTMHQ
                **  *.* * * ***         *:* **  **  :* **.***
BoxShade v3.31 C (beta, 970507) Output
AT1G49010.1     M E S V V A T W S R E E E K A F E N A I A L H C V E E E I T E D Q W N K M S S M V P S K A L E E V K K H Y Q I L L E D V
gm011625_Glyma0    M S S S G T I W S Y D E E K A F E N A I A M H W I E E S - S K E Q W E K I A S A V P S K S M E E V K Q H Y Q V L V E D V
 
AT1G49010.1     K A I E N G Q V P L P R Y H H R K G L I V D E A A A A A T S P A N R D S H S S G - - - S S E K K P N - - - - P G T S G I
gm011625_Glyma0    S A I E A G H I S F P N Y - - - - - - - - - - - A S D E T T S S N K D F H G S S K A T S S D K R S N C N Y G S G F S G L
 
AT1G49010.1     - - - - S S S N G G R S G G S R - A E Q E R R K G I P W T E E E H R L F L L G L D K F G K G D W R S I S R N F V I S R T
gm011625_Glyma0    G L D S T T H S S G K G G L S R S S E Q E R R K G I P W T E E E H R L F L L G L D K F G K G D W R S I S R N F V I S R T
 
AT1G49010.1     P T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T T V N N - - - - - - Q A P A V T G G G Q Q P - - - - - - -
gm011625_Glyma0    P T Q V A S H A Q K Y F I R L N S M N R D R R R S S I H D I T S V N N G D V A S S Q A P - I T G L H S S T I S S N T M G
 
AT1G49010.1     - - Q V V K H R P A Q P Q P Q P Q P Q P Q Q H H P P T M A G L G M Y G G A P V G Q P I I A P P D H M G S A V G T P V M L
gm011625_Glyma0    V G Q S L K H R - - - - - - - - - - - V Q G H I P P - - - G L G M Y - G T P V G H P V A A P P G H M A S A V G T P V M L
 
AT1G49010.1     P P P M G T H - H H H H H H H L G V A P Y A V P A Y P V P P - - L P Q Q H P - A P S T M H -
gm011625_Glyma0    P P - - G P H P H P H P H H H - - - - - - - - - A H P H P P Y V L P L A Y P M A P P T M H Q
 
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