fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019259 not found in 381aa AT3G18990.1 not_not 0.543123543 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49480.1     MQMDSAQ----------------NQFNKR--------ARL--------------------
pt019259_POPTR_ MPRPFFQKLILPGTIREKRLRIPDNFVKKFGHDLLGFARLIVPGGHVSRIGLIKADEKLW
                *     *                ::* *:        ***                    

AT1G49480.1     FEDP-------------------------------ELKDAKVIYPSN-------------
pt019259_POPTR_ FHDGWQQFVERFAIHIGYFLIFQYEGNAIFNVHIFNLPTSEINYHSNSLSGKIYLAFEEL
                *.*                                :*  ::: * **             

AT1G49480.1     -----------PESTEPVNKGYGGSTAIQSFFKESKAE----------------------
pt019259_POPTR_ EDDDSAASSGIPTTQLIVNKSY-NPPALQNLLSGSKLNNCLNWGGEENMHLTKSANVSQV
                           * :   ***.* ...*:*.::. ** :                      

AT1G49480.1     -----------------------------ETPKVLKKRGRKKKNPNPEEVNSSTPGGDDS
pt019259_POPTR_ ANESARNVFAQYNEHKNSQEEVKLYSPDGETPK-LKKRGRKRLKVDPNEQQLSSPNEDDG
                                             **** *******: : :*:* : *:*. **.

AT1G49480.1     ENRSKFYESASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGF
pt019259_POPTR_ EMSFRFYESASARKRTVTAEERERAMNAAKAYAPDNPYCRVVLRPSYLYRGCIMYLPSGF
                *   :********************:****:: * *** *********************

AT1G49480.1     AEKYLSGISGFIKLQLGE-KQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLR
pt019259_POPTR_ AEKNLNGLSGFMKLQLPDGKQWPVRCLYRGGRAKFSQGWYEFTLENNLGEGDVCVFELLK
                *** *.*:***:**** : *********:.*****************:***********:

AT1G49480.1     TRDFVLEVTAFRVNEYV------
pt019259_POPTR_ SRDVVLKVTVFRVLEDGGLMNHP
                :**.**:**.*** *
BoxShade v3.31 C (beta, 970507) Output
AT1G49480.1     M Q M D S A Q - - - - - - - - - - - - - - - - N Q F N K R - - - - - - - - A R L - - - - - - - - - - - - - - - - - - - -
pt019259_POPTR_    M P R P F F Q K L I L P G T I R E K R L R I P D N F V K K F G H D L L G F A R L I V P G G H V S R I G L I K A D E K L W
 
AT1G49480.1     F E D P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E L K D A K V I Y P S N - - - - - - - - - - - - -
pt019259_POPTR_    F H D G W Q Q F V E R F A I H I G Y F L I F Q Y E G N A I F N V H I F N L P T S E I N Y H S N S L S G K I Y L A F E E L
 
AT1G49480.1     - - - - - - - - - - - P E S T E P V N K G Y G G S T A I Q S F F K E S K A E - - - - - - - - - - - - - - - - - - - - - -
pt019259_POPTR_    E D D D S A A S S G I P T T Q L I V N K S Y - N P P A L Q N L L S G S K L N N C L N W G G E E N M H L T K S A N V S Q V
 
AT1G49480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E T P K V L K K R G R K K K N P N P E E V N S S T P G G D D S
pt019259_POPTR_    A N E S A R N V F A Q Y N E H K N S Q E E V K L Y S P D G E T P K - L K K R G R K R L K V D P N E Q Q L S S P N E D D G
 
AT1G49480.1     E N R S K F Y E S A S A R K R T V T A E E R E R A V N A A K T F E P T N P Y F R V V L R P S Y L Y R G C I M Y L P S G F
pt019259_POPTR_    E M S F R F Y E S A S A R K R T V T A E E R E R A M N A A K A Y A P D N P Y C R V V L R P S Y L Y R G C I M Y L P S G F
 
AT1G49480.1     A E K Y L S G I S G F I K L Q L G E - K Q W P V R C L Y K A G R A K F S Q G W Y E F T L E N N I G E G D V C V F E L L R
pt019259_POPTR_    A E K N L N G L S G F M K L Q L P D G K Q W P V R C L Y R G G R A K F S Q G W Y E F T L E N N L G E G D V C V F E L L K
 
AT1G49480.1     T R D F V L E V T A F R V N E Y V - - - - - -
pt019259_POPTR_    S R D V V L K V T V F R V L E D G G L M N H P
 
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