fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021991 not found in 381aa AT3G18990.1 1st_not 0.545454545 II
Pt019259 not found in 381aa AT3G18990.1 not_not 0.543123543 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G49480.1     ----------------------------------------------------------MQ
pt019259_POPTR_ MPRPFFQKLILPGTIREKRLRIPDNFVKKFGHDLLGFARLIVPGGHVSRIGLIKADEKLW
pt021991_POPTR_ MPRPFFQKLILSSTIREKRLRIPDNFVKKFGHDISSFVRLIVPGGHVSRIGLIKADDKLW
                                                                          : 

AT1G49480.1     MDSAQNQFNKR--------------------ARLFEDPELKDAKVIYPSN----------
pt019259_POPTR_ FHDGWQQFVERFAIHIGYFLIFQYEGNAIFNVHIFNLPT---SEINYHSNSLSGKIYLAF
pt021991_POPTR_ FHDGWQQFVERFAIHVGYFLIFRYEGNAIFNVHIFNLPT---SEINYHSNSLSGKRYLAF
                :... :** :*                    .::*: *    ::: * **          

AT1G49480.1     --------------PESTEPVNKGYGGSTAIQSFFKESKAE-------------------
pt019259_POPTR_ EELEDDDSAASSGIPTTQLIVNKSY-NPPALQNLLSGSKLNNCLNWGGEENMHLTKSANV
pt021991_POPTR_ EELDNDENAENSGIPPPQLIVNKSY-NPPSLQNLFSGSKLNNCINWSGEDTMRLTKGSNI
                              * .   ***.* ...::*.::. ** :                   

AT1G49480.1     --------------------------------ETPKVLKKRGRKKKNPNPEEVNSSTPGG
pt019259_POPTR_ SQVANESARNVFAQYNEHKNSQEEVKLYSPDGETPK-LKKRGRKRLKVDPNEQQLSSPNE
pt021991_POPTR_ SQVANESARNVGAHYNELYNSQDEVKLYSPDGETPK-PKKRGRKRLKADPNEQQLSSPHD
                                                ****  ******: : :*:* : *:*  

AT1G49480.1     DDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLP
pt019259_POPTR_ DDGEMSFRFYESASARKRTVTAEERERAMNAAKAYAPDNPYCRVVLRPSYLYRGCIMYLP
pt021991_POPTR_ DDSEMRFRFYESASARKRTVTAEERERAMNAAKAYAPDNPYCRVVLRPSYLYRGCIMYLP
                **.*   :********************:****:: * *** ******************

AT1G49480.1     SGFAEKYLSGISGFIKLQLGE-KQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFE
pt019259_POPTR_ SGFAEKNLNGLSGFMKLQLPDGKQWPVRCLYRGGRAKFSQGWYEFTLENNLGEGDVCVFE
pt021991_POPTR_ SGFAEKNLNGVSGFIILQLPDGKQWPVRCLYRGGRAKFSQGWYEFTLENNLGEGDVCIFE
                ****** *.*:***: *** : *********:.*****************:******:**

AT1G49480.1     LLRTRDFVLEVTAFRVNEYV------
pt019259_POPTR_ LLKSRDVVLKVTVFRVLEDGGLMNHP
pt021991_POPTR_ LLKSRDVVLKVTLFRVLEDGGLMNHP
                **::**.**:** *** *
BoxShade v3.31 C (beta, 970507) Output
AT1G49480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q
pt019259_POPTR_    M P R P F F Q K L I L P G T I R E K R L R I P D N F V K K F G H D L L G F A R L I V P G G H V S R I G L I K A D E K L W
pt021991_POPTR_    M P R P F F Q K L I L S S T I R E K R L R I P D N F V K K F G H D I S S F V R L I V P G G H V S R I G L I K A D D K L W
 
AT1G49480.1     M D S A Q N Q F N K R - - - - - - - - - - - - - - - - - - - - A R L F E D P E L K D A K V I Y P S N - - - - - - - - - -
pt019259_POPTR_    F H D G W Q Q F V E R F A I H I G Y F L I F Q Y E G N A I F N V H I F N L P T - - - S E I N Y H S N S L S G K I Y L A F
pt021991_POPTR_    F H D G W Q Q F V E R F A I H V G Y F L I F R Y E G N A I F N V H I F N L P T - - - S E I N Y H S N S L S G K R Y L A F
 
AT1G49480.1     - - - - - - - - - - - - - - P E S T E P V N K G Y G G S T A I Q S F F K E S K A E - - - - - - - - - - - - - - - - - - -
pt019259_POPTR_    E E L E D D D S A A S S G I P T T Q L I V N K S Y - N P P A L Q N L L S G S K L N N C L N W G G E E N M H L T K S A N V
pt021991_POPTR_    E E L D N D E N A E N S G I P P P Q L I V N K S Y - N P P S L Q N L F S G S K L N N C I N W S G E D T M R L T K G S N I
 
AT1G49480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E T P K V L K K R G R K K K N P N P E E V N S S T P G G
pt019259_POPTR_    S Q V A N E S A R N V F A Q Y N E H K N S Q E E V K L Y S P D G E T P K - L K K R G R K R L K V D P N E Q Q L S S P N E
pt021991_POPTR_    S Q V A N E S A R N V G A H Y N E L Y N S Q D E V K L Y S P D G E T P K - P K K R G R K R L K A D P N E Q Q L S S P H D
 
AT1G49480.1     D D S E N R S K F Y E S A S A R K R T V T A E E R E R A V N A A K T F E P T N P Y F R V V L R P S Y L Y R G C I M Y L P
pt019259_POPTR_    D D G E M S F R F Y E S A S A R K R T V T A E E R E R A M N A A K A Y A P D N P Y C R V V L R P S Y L Y R G C I M Y L P
pt021991_POPTR_    D D S E M R F R F Y E S A S A R K R T V T A E E R E R A M N A A K A Y A P D N P Y C R V V L R P S Y L Y R G C I M Y L P
 
AT1G49480.1     S G F A E K Y L S G I S G F I K L Q L G E - K Q W P V R C L Y K A G R A K F S Q G W Y E F T L E N N I G E G D V C V F E
pt019259_POPTR_    S G F A E K N L N G L S G F M K L Q L P D G K Q W P V R C L Y R G G R A K F S Q G W Y E F T L E N N L G E G D V C V F E
pt021991_POPTR_    S G F A E K N L N G V S G F I I L Q L P D G K Q W P V R C L Y R G G R A K F S Q G W Y E F T L E N N L G E G D V C I F E
 
AT1G49480.1     L L R T R D F V L E V T A F R V N E Y V - - - - - -
pt019259_POPTR_    L L K S R D V V L K V T V F R V L E D G G L M N H P
pt021991_POPTR_    L L K S R D V V L K V T L F R V L E D G G L M N H P
 
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