fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053491 not found in 435aa AT3G18990.1 1st_not 0.522144522 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49480.1     -------------------------------------------------MQMDSAQNQ--
gm053491_Glyma2 MPRPCFHKLVLPTTLQSRQLRIPDNFLRKYGTQLSTIATLTVPDGSVWRIGLKKADNRIL
                                                                 : :..*:*:  

AT1G49480.1     ----------------------------------FNK-----------RAR---------
gm053491_Glyma2 FVDGWQDFVQHYSIGVGYFLVFMYEGNSSFIVHIFNLSTSEVNYQSAIRNRNEGSCLANY
                                                  **            * *         

AT1G49480.1     --LFEDPELKDAKVIYPSNPESTEP---VNKGYGGST-----------AIQSF-------
gm053491_Glyma2 HHIFDEMEDVDSLDLSDLSPQYLTPGSLQNKGCVGSVDQLTPGKSHTPALQNLFNGGSKL
                  :*:: *  *:  :   .*:   *    ***  **.           *:*.:       

AT1G49480.1     ------------------------------------FKESKAE-----ETPKVLKKRGRK
gm053491_Glyma2 NRINWGDGGSAFSSKNANSQGNQSTRDIGVQFNANEFKRSTEELKLRYSNEETVNKTAKK
                                                    **.*. *     .. :.::* .:*

AT1G49480.1     KKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPTNPYFRV
gm053491_Glyma2 KRKSEPYGEEPSGENEEEAEMRYRFYESASARKRTVTAEERERAINASKTFEPTNPFCRV
                *::.:*   :.*  . :::* * :********************:**:********: **

AT1G49480.1     VLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLYKAGRAKFSQGWYE
gm053491_Glyma2 VLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQLSNGRQWSVRCLYRGGRAKLSQGWFE
                ***************** **** *.*:********.: :**.*****:.****:****:*

AT1G49480.1     FTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNEYV------------------------
gm053491_Glyma2 FTVENNLGEGDVCVFELLRTKEVVLQVTVFRVTEDAGLLNQPPMMQQQHIPNMSHTKLLN
                **:***:*************::.**:**.***.* .                        

AT1G49480.1     ---------------
gm053491_Glyma2 PHLQHRVSTTKLIRN
BoxShade v3.31 C (beta, 970507) Output
AT1G49480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q M D S A Q N Q - -
gm053491_Glyma2    M P R P C F H K L V L P T T L Q S R Q L R I P D N F L R K Y G T Q L S T I A T L T V P D G S V W R I G L K K A D N R I L
 
AT1G49480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F N K - - - - - - - - - - - R A R - - - - - - - - -
gm053491_Glyma2    F V D G W Q D F V Q H Y S I G V G Y F L V F M Y E G N S S F I V H I F N L S T S E V N Y Q S A I R N R N E G S C L A N Y
 
AT1G49480.1     - - L F E D P E L K D A K V I Y P S N P E S T E P - - - V N K G Y G G S T - - - - - - - - - - - A I Q S F - - - - - - -
gm053491_Glyma2    H H I F D E M E D V D S L D L S D L S P Q Y L T P G S L Q N K G C V G S V D Q L T P G K S H T P A L Q N L F N G G S K L
 
AT1G49480.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F K E S K A E - - - - - E T P K V L K K R G R K
gm053491_Glyma2    N R I N W G D G G S A F S S K N A N S Q G N Q S T R D I G V Q F N A N E F K R S T E E L K L R Y S N E E T V N K T A K K
 
AT1G49480.1     K K N P N P E E V N S S T P G G D D S E N R S K F Y E S A S A R K R T V T A E E R E R A V N A A K T F E P T N P Y F R V
gm053491_Glyma2    K R K S E P Y G E E P S G E N E E E A E M R Y R F Y E S A S A R K R T V T A E E R E R A I N A S K T F E P T N P F C R V
 
AT1G49480.1     V L R P S Y L Y R G C I M Y L P S G F A E K Y L S G I S G F I K L Q L G E - K Q W P V R C L Y K A G R A K F S Q G W Y E
gm053491_Glyma2    V L R P S Y L Y R G C I M Y L P S C F A E K N L N G V S G F I K L Q L S N G R Q W S V R C L Y R G G R A K L S Q G W F E
 
AT1G49480.1     F T L E N N I G E G D V C V F E L L R T R D F V L E V T A F R V N E Y V - - - - - - - - - - - - - - - - - - - - - - - -
gm053491_Glyma2    F T V E N N L G E G D V C V F E L L R T K E V V L Q V T V F R V T E D A G L L N Q P P M M Q Q Q H I P N M S H T K L L N
 
AT1G49480.1     - - - - - - - - - - - - - - -
gm053491_Glyma2    P H L Q H R V S T T K L I R N
 
0