fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp004782 AMTGGGLGLGLGGGMT in 283/424 AT1G49720.1 1st_1st 0.248294679 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49720.1     MGTH----------IDINNLGGDTSRGNESKPLARQSSLYSLTFDELQSTLGEPGKDFGS
pp004782_Pp1s49 MGANGASSSGVSNGLASSSLAGAGSRFNS---LAPQSPIYSLTLDEFQTALSEPAKNLGS
                **::          :  ..*.*  ** *.   ** **.:****:**:*::*.**.*::**

AT1G49720.1     MNMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDE
pp004782_Pp1s49 MNMDEFVKNIWS-------------------SGELSRQPSLQKQGSISLPRTLSMKTVDE
                *****::****:                   ** :.   .**:***::****** *****

AT1G49720.1     VWKYLN------SKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSS
pp004782_Pp1s49 VWNDIHRGLSEQSEAGGEPVGGGSEQERTKTFKKMTLEDFLVKAGVVMED----SEAATQ
                **: ::      *: *.:   * .  ** :*: :*******::**** **    .* ::.

AT1G49720.1     GFYANNGAAGLEFGFGQPNQNSISFNGNNSSMIMNQAPGLGL------------------
pp004782_Pp1s49 GFSSFMGGAGIQ------EKSRIAHGGRAGEIV----PTLSLSPANVMTSQATIGSMQID
                ** :  *.**::      ::. *:..*. ..::    * *.*                  

AT1G49720.1     -----KVGGTMQQQQQPHQQQLQQPHQRLPPTIFPKQANVTFAAPVNMVNR---------
pp004782_Pp1s49 AYNKNQAAGTQQQQQQQQADWLR--------SIAQQQAAAE-AAYANVAAKRMGNGAGPM
                     :..** ***** : : *:        :*  :** .  ** .*:. :         

AT1G49720.1     ----GLFETSADGPA-NSNMGGA----------GGTVTAT---------SPGTSSAENNT
pp004782_Pp1s49 VGMGGLRMGGAIGPSMGPGMGGAMTGGGLGLGLGGGMTANMGMGANSPPSPDSDGGRSGL
                    **   .* **: ...****          ** :**.         **.:...... 

AT1G49720.1     WSSPVPY-----VFGRGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEI
pp004782_Pp1s49 SLSPIQYGADGSVRGRKRGSDGAVEKVVERRQRRMIKNRESAARSRARKQAYTVELEAEV
                  **: *     * ** * *: .:********:********************:*****:

AT1G49720.1     ESLKLVNQDLQKKQAEIMKTHNSELKEFSKQPPLLAKRQCLRRTLTG----PW-------
pp004782_Pp1s49 SQLKEENMRLRKHQV------------CTRGP------ECVRWFVVGKAGASWQLVQRVG
                ..**  *  *:*:*.             :: *      :*:*  :.*    .*       

AT1G49720.1     -------
pp004782_Pp1s49 NGGGLCG
BoxShade v3.31 C (beta, 970507) Output
AT1G49720.1     M G T H - - - - - - - - - - I D I N N L G G D T S R G N E S K P L A R Q S S L Y S L T F D E L Q S T L G E P G K D F G S
pp004782_Pp1s49    M G A N G A S S S G V S N G L A S S S L A G A G S R F N S - - - L A P Q S P I Y S L T L D E F Q T A L S E P A K N L G S
 
AT1G49720.1     M N M D E L L K N I W T A E D T Q A F M T T T S S V A A P G P S G F V P G G N G L Q R Q G S L T L P R T L S Q K T V D E
pp004782_Pp1s49    M N M D E F V K N I W S - - - - - - - - - - - - - - - - - - - S G E L S R Q P S L Q K Q G S I S L P R T L S M K T V D E
 
AT1G49720.1     V W K Y L N - - - - - - S K E G S N G N T G T D A L E R Q Q T L G E M T L E D F L L R A G V V K E D N T Q Q N E N S S S
pp004782_Pp1s49    V W N D I H R G L S E Q S E A G G E P V G G G S E Q E R T K T F K K M T L E D F L V K A G V V M E D - - - - S E A A T Q
 
AT1G49720.1     G F Y A N N G A A G L E F G F G Q P N Q N S I S F N G N N S S M I M N Q A P G L G L - - - - - - - - - - - - - - - - - -
pp004782_Pp1s49    G F S S F M G G A G I Q - - - - - - E K S R I A H G G R A G E I V - - - - P T L S L S P A N V M T S Q A T I G S M Q I D
 
AT1G49720.1     - - - - - K V G G T M Q Q Q Q Q P H Q Q Q L Q Q P H Q R L P P T I F P K Q A N V T F A A P V N M V N R - - - - - - - - -
pp004782_Pp1s49    A Y N K N Q A A G T Q Q Q Q Q Q Q Q A D W L R - - - - - - - - S I A Q Q Q A A A E - A A Y A N V A A K R M G N G A G P M
 
AT1G49720.1     - - - - G L F E T S A D G P A - N S N M G G A - - - - - - - - - - G G T V T A T - - - - - - - - - S P G T S S A E N N T
pp004782_Pp1s49    V G M G G L R M G G A I G P S M G P G M G G A M T G G G L G L G L G G G M T A N M G M G A N S P P S P D S D G G R S G L
 
AT1G49720.1     W S S P V P Y - - - - - V F G R G R R S N T G L E K V V E R R Q K R M I K N R E S A A R S R A R K Q A Y T L E L E A E I
pp004782_Pp1s49    S L S P I Q Y G A D G S V R G R K R G S D G A V E K V V E R R Q R R M I K N R E S A A R S R A R K Q A Y T V E L E A E V
 
AT1G49720.1     E S L K L V N Q D L Q K K Q A E I M K T H N S E L K E F S K Q P P L L A K R Q C L R R T L T G - - - - P W - - - - - - -
pp004782_Pp1s49    S Q L K E E N M R L R K H Q V - - - - - - - - - - - - C T R G P - - - - - - E C V R W F V V G K A G A S W Q L V Q R V G
 
AT1G49720.1     - - - - - - -
pp004782_Pp1s49    N G G G L C G
 
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