fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022077 not found in 424aa AT3G19290.1 1st_not 0.424283765 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49720.1     MGTHIDINNLG------GDTSRGNESKPLARQSSLYSLTFDELQSTLGEPG---KDFGSM
pt022077_POPTR_ MDSHWDFKNFGNASPGQGSVRKSPENPPLVRQSSVYSLTFDEFQNTWG--GGLQKDFGSM
                *.:* *::*:*      *.. :. *. **.****:*******:*.* *  *   ******

AT1G49720.1     NMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEV
pt022077_POPTR_ NMDELLKNIWTAEETQA-MTNTVGV---GGEGSTPDGN-LQRQGSLTLPRTLSQKTVDEV
                *************:*** **.* .*   * .* .*.** *********************

AT1G49720.1     WKYLNSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSSGFYA---
pt022077_POPTR_ WRDL-IKETS-GGAGSNLPQRQQTLREMTLEEFLVRAGVVREDTQQIGRPNNSGFFGELS
                *: *  ** * *.:*::  :***** *****:**:*****:**. * .. ..***:.   

AT1G49720.1     -------NNGAAGLEFGFGQPNQNSISFNGNN---------SSMIMNQAPGLGLKVGGTM
pt022077_POPTR_ QLNTNNNNNNTTGLALGFQQP-------NGNNGLMGTGIMENNLVSNQPSSLALNVGGIR
                       **.::** :** **       ****         ..:: **...*.*:***  

AT1G49720.1     QQQQQPHQQQLQQPHQRLPPTIFPK-QANVTFAAPVNMVN---------RGLFETSADGP
pt022077_POPTR_ PSQQLPQPQQ-QQP-------LFPKPAATVVFASPLHVANNVQLASPGVRG----SVVGI
                 .** *: ** ***       :***  *.*.**:*:::.*         **    *. * 

AT1G49720.1     ANS---------------NMGGAGGTVTATSPGT---------SSAENNTWSSPVPYVFG
pt022077_POPTR_ ANRSVNNGLAHSRGMGMVSLAARGVTVATESPANRISPDVIAKSNADTSSL-SPVPFVFS
                **                .:.. * **:: **..         *.*:..:  ****:**.

AT1G49720.1     RGRRSNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQA
pt022077_POPTR_ RGRKPSAALEKVVERRQRRMIKNRESAARSRARKQAYTLELEDEVAKLKELNKELQRKQA
                ***:..:.*********:************************ *: .** :*::**:***

AT1G49720.1     EIMKTHNSELKEFSKQPPLLAKRQCLRRTLTGPW
pt022077_POPTR_ EIFEMQKNQFLE-TMKAQWGGKRQCLRRTLTGPW
                **:: ::.:: * : :.   .*************
BoxShade v3.31 C (beta, 970507) Output
AT1G49720.1     M G T H I D I N N L G - - - - - - G D T S R G N E S K P L A R Q S S L Y S L T F D E L Q S T L G E P G - - - K D F G S M
pt022077_POPTR_    M D S H W D F K N F G N A S P G Q G S V R K S P E N P P L V R Q S S V Y S L T F D E F Q N T W G - - G G L Q K D F G S M
 
AT1G49720.1     N M D E L L K N I W T A E D T Q A F M T T T S S V A A P G P S G F V P G G N G L Q R Q G S L T L P R T L S Q K T V D E V
pt022077_POPTR_    N M D E L L K N I W T A E E T Q A - M T N T V G V - - - G G E G S T P D G N - L Q R Q G S L T L P R T L S Q K T V D E V
 
AT1G49720.1     W K Y L N S K E G S N G N T G T D A L E R Q Q T L G E M T L E D F L L R A G V V K E D N T Q Q N E N S S S G F Y A - - -
pt022077_POPTR_    W R D L - I K E T S - G G A G S N L P Q R Q Q T L R E M T L E E F L V R A G V V R E D T Q Q I G R P N N S G F F G E L S
 
AT1G49720.1     - - - - - - - N N G A A G L E F G F G Q P N Q N S I S F N G N N - - - - - - - - - S S M I M N Q A P G L G L K V G G T M
pt022077_POPTR_    Q L N T N N N N N N T T G L A L G F Q Q P - - - - - - - N G N N G L M G T G I M E N N L V S N Q P S S L A L N V G G I R
 
AT1G49720.1     Q Q Q Q Q P H Q Q Q L Q Q P H Q R L P P T I F P K - Q A N V T F A A P V N M V N - - - - - - - - - R G L F E T S A D G P
pt022077_POPTR_    P S Q Q L P Q P Q Q - Q Q P - - - - - - - L F P K P A A T V V F A S P L H V A N N V Q L A S P G V R G - - - - S V V G I
 
AT1G49720.1     A N S - - - - - - - - - - - - - - - N M G G A G G T V T A T S P G T - - - - - - - - - S S A E N N T W S S P V P Y V F G
pt022077_POPTR_    A N R S V N N G L A H S R G M G M V S L A A R G V T V A T E S P A N R I S P D V I A K S N A D T S S L - S P V P F V F S
 
AT1G49720.1     R G R R S N T G L E K V V E R R Q K R M I K N R E S A A R S R A R K Q A Y T L E L E A E I E S L K L V N Q D L Q K K Q A
pt022077_POPTR_    R G R K P S A A L E K V V E R R Q R R M I K N R E S A A R S R A R K Q A Y T L E L E D E V A K L K E L N K E L Q R K Q A
 
AT1G49720.1     E I M K T H N S E L K E F S K Q P P L L A K R Q C L R R T L T G P W
pt022077_POPTR_    E I F E M Q K N Q F L E - T M K A Q W G G K R Q C L R R T L T G P W
 
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