fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018930 not found in 414aa AT3G19290.1 not_not 0.421555252 III
Pt018929 not found in 433aa AT3G19290.1 not_not 0.413369713 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G49720.1     MGTHIDINNLG----GDTS--RGNESKPLARQSSLYSLTFDELQSTLGEPG---KDFGSM
pt018930_POPTR_ MDSQWDYKNFGNAPPGQSSVTKPQENPFLIRQSSVYSLTFDEFQNTWG--GGLRKDFGSM
pt018929_POPTR_ MDSQWDYKNFGNAPPGQSSVTKPQENPFLIRQSSVYSLTFDEFQNTWG--GGLRKDFGSM
                *.:: * :*:*    *::*  : :*.  * ****:*******:*.* *  *   ******

AT1G49720.1     NMDELLKNIWTAEDTQAFMTTTSSVAAPGPSGFVPGGNGLQRQGSLTLPRTLSQKTVDEV
pt018930_POPTR_ NMEELLKNIWTAEETQA-MTNTLGV---GSEGSAPGGN-LQRQGSLTLPRTLSQKTVDEL
pt018929_POPTR_ NMEELLKNIWTAEETQA-MTNTLGV---GSEGSAPGGN-LQRQGSLTLPRTLSQKTVDEL
                **:**********:*** **.* .*   *..* .**** ********************:

AT1G49720.1     WKYL-----NSKEGSNGNTGTDALERQQTLGEMTLEDFLLRAGVVKEDNTQQNENSSSGF
pt018930_POPTR_ WRDLIKETSGAAEDGSGSAGSNLPQRQQTLGETTLEEFLVRAGVVREDTQQIGRPDNSGF
pt018929_POPTR_ WRDLIKETSGAAEDGSGSAGSNLPQRQQTLGETTLEEFLVRAGVVREDTQQIGRPDNSGF
                *: *     .: *...*.:*::  :******* ***:**:*****:**. * .. ..***

AT1G49720.1     YA------NNGAAGLEFGFGQPNQNSISFNG--------NNSSMIMNQAPGLGLKVGGTM
pt018930_POPTR_ FGELSLLNNNNDSSLAIGFQQPNGN----NGLMGTWRMENNGNLVANQPPSLTLDAGGIR
pt018929_POPTR_ FGELSLLNNNNDSSLAIGFQQPNGN----NGLMGTWRMENNGNLVANQPPSLTLDAGGIR
                :.      **. :.* :** *** *    **        **..:: **.*.* *..**  

AT1G49720.1     QQQQQPHQQQLQQPHQRLPPTIFPK-QANVTFAAPVNMVNRGLFETS---------ADGP
pt018930_POPTR_ PTQQLPQSRQLSQQQQLL----FPKPAATVAFASPLHLSNNAQLASPGVRRSVVGIADRS
pt018929_POPTR_ PTQQLPQSRQLSQQQQLL----FPKPAATVAFASPLHLSNNAQLASPGVRRSVVGIADRS
                  ** *:.:**.* :* *    ***  *.*:**:*::: *.. : :.         ** .

AT1G49720.1     ANSNMGGAGGT--VTATSPGT------------------SSAENNTWSSPVPYVFGRGRR
pt018930_POPTR_ VNNGLAHSGGMGIVSLATGG-------------------SNADTSSL-SPVPYVFSRGRK
pt018929_POPTR_ VNNGLAHSGGMGIVSLATGGVTIATGSSANRVSPDVIAKSNADTSSL-SPVPYVFSRGRK
                .*..:. :**   *: :: *                   *.*:..:  *******.***:

AT1G49720.1     SNTGLEKVVERRQKRMIKNRESAARSRARKQAYTLELEAEIESLKLVNQDLQKKQAEIMK
pt018930_POPTR_ ASTALEKVAERRQRRMIKNRESAARSRTLKQAHTQKLEDEVAKLKELNEVLQRKQAEIIE
pt018929_POPTR_ ASTALEKVAERRQRRMIKNRESAARSRTLKQAHTQKLEDEVAKLKELNEVLQRKQAEIIE
                :.*.****.****:*************: ***:* :** *: .** :*: **:*****::

AT1G49720.1     THNSELKEFSKQPPLLAKRQCLRRTLTGPW
pt018930_POPTR_ MQQNQFFE-TKKAQWGGKRQCLRRTLTGPW
pt018929_POPTR_ MQQNQFFE-TKKAQWGGKRQCLRRTLTGPW
                 ::.:: * :*:.   .*************
BoxShade v3.31 C (beta, 970507) Output
AT1G49720.1     M G T H I D I N N L G - - - - G D T S - - R G N E S K P L A R Q S S L Y S L T F D E L Q S T L G E P G - - - K D F G S M
pt018930_POPTR_    M D S Q W D Y K N F G N A P P G Q S S V T K P Q E N P F L I R Q S S V Y S L T F D E F Q N T W G - - G G L R K D F G S M
pt018929_POPTR_    M D S Q W D Y K N F G N A P P G Q S S V T K P Q E N P F L I R Q S S V Y S L T F D E F Q N T W G - - G G L R K D F G S M
 
AT1G49720.1     N M D E L L K N I W T A E D T Q A F M T T T S S V A A P G P S G F V P G G N G L Q R Q G S L T L P R T L S Q K T V D E V
pt018930_POPTR_    N M E E L L K N I W T A E E T Q A - M T N T L G V - - - G S E G S A P G G N - L Q R Q G S L T L P R T L S Q K T V D E L
pt018929_POPTR_    N M E E L L K N I W T A E E T Q A - M T N T L G V - - - G S E G S A P G G N - L Q R Q G S L T L P R T L S Q K T V D E L
 
AT1G49720.1     W K Y L - - - - - N S K E G S N G N T G T D A L E R Q Q T L G E M T L E D F L L R A G V V K E D N T Q Q N E N S S S G F
pt018930_POPTR_    W R D L I K E T S G A A E D G S G S A G S N L P Q R Q Q T L G E T T L E E F L V R A G V V R E D T Q Q I G R P D N S G F
pt018929_POPTR_    W R D L I K E T S G A A E D G S G S A G S N L P Q R Q Q T L G E T T L E E F L V R A G V V R E D T Q Q I G R P D N S G F
 
AT1G49720.1     Y A - - - - - - N N G A A G L E F G F G Q P N Q N S I S F N G - - - - - - - - N N S S M I M N Q A P G L G L K V G G T M
pt018930_POPTR_    F G E L S L L N N N N D S S L A I G F Q Q P N G N - - - - N G L M G T W R M E N N G N L V A N Q P P S L T L D A G G I R
pt018929_POPTR_    F G E L S L L N N N N D S S L A I G F Q Q P N G N - - - - N G L M G T W R M E N N G N L V A N Q P P S L T L D A G G I R
 
AT1G49720.1     Q Q Q Q Q P H Q Q Q L Q Q P H Q R L P P T I F P K - Q A N V T F A A P V N M V N R G L F E T S - - - - - - - - - A D G P
pt018930_POPTR_    P T Q Q L P Q S R Q L S Q Q Q Q L L - - - - F P K P A A T V A F A S P L H L S N N A Q L A S P G V R R S V V G I A D R S
pt018929_POPTR_    P T Q Q L P Q S R Q L S Q Q Q Q L L - - - - F P K P A A T V A F A S P L H L S N N A Q L A S P G V R R S V V G I A D R S
 
AT1G49720.1     A N S N M G G A G G T - - V T A T S P G T - - - - - - - - - - - - - - - - - - S S A E N N T W S S P V P Y V F G R G R R
pt018930_POPTR_    V N N G L A H S G G M G I V S L A T G G - - - - - - - - - - - - - - - - - - - S N A D T S S L - S P V P Y V F S R G R K
pt018929_POPTR_    V N N G L A H S G G M G I V S L A T G G V T I A T G S S A N R V S P D V I A K S N A D T S S L - S P V P Y V F S R G R K
 
AT1G49720.1     S N T G L E K V V E R R Q K R M I K N R E S A A R S R A R K Q A Y T L E L E A E I E S L K L V N Q D L Q K K Q A E I M K
pt018930_POPTR_    A S T A L E K V A E R R Q R R M I K N R E S A A R S R T L K Q A H T Q K L E D E V A K L K E L N E V L Q R K Q A E I I E
pt018929_POPTR_    A S T A L E K V A E R R Q R R M I K N R E S A A R S R T L K Q A H T Q K L E D E V A K L K E L N E V L Q R K Q A E I I E
 
AT1G49720.1     T H N S E L K E F S K Q P P L L A K R Q C L R R T L T G P W
pt018930_POPTR_    M Q Q N Q F F E - T K K A Q W G G K R Q C L R R T L T G P W
pt018929_POPTR_    M Q Q N Q F F E - T K K A Q W G G K R Q C L R R T L T G P W
 
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