fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030731 not found in 220aa AT1G49770.1 1st_1st 0.326039387 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49770.1     MTNAQELGQEGFMWGISNSDDSGGGCKRIEKEPLPSHPSHPSPEIQTTTVKKGKKRTKRN
pt030731_POPTR_ MHKSNGKGSVGEV-----KEGKGGG-----------------------------------
                * :::  *. * :     .:..***                                   

AT1G49770.1     DKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLE
pt030731_POPTR_ ------ES-DHETHIWTERERRKKMRTMFSNLHALLPQLPPKADKSTIVDEAMNYIKTLQ
                      ** *** ************* ***:*********************:. **:*:

AT1G49770.1     QTLQKLEMQKLEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYP
pt030731_POPTR_ HTLQKLQKEKLERLQGA---------TTFGYEPS-------LIAP-------QMQADS--
                :*****: :***:** :         ***.* **       *::*          :**  

AT1G49770.1     RAAFLADQVSSSSAAAA---NLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKHK
pt030731_POPTR_ REAFLADQVSSSNLAISTTKSLPSVSRYPVL-FQTWTSSNVVLNICGDEAQISICSPKN-
                * **********. * :   .**  .. *:: *:**:* ****.***:** :.:* **: 

AT1G49770.1     PGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQAQVNPSCENQLLGNGLGVVDVFKQV
pt030731_POPTR_ PGLFTTICYVLEKHNVEVLSAHVSSDCSRSMYMIQAHL----------------------
                **:**::**::**:*:*** *:***:   * *:***::                      

AT1G49770.1     SQELVLYFSSL-------
pt030731_POPTR_ --QTYIYIVSKNQFNLKA
                  :  :*: *
BoxShade v3.31 C (beta, 970507) Output
AT1G49770.1     M T N A Q E L G Q E G F M W G I S N S D D S G G G C K R I E K E P L P S H P S H P S P E I Q T T T V K K G K K R T K R N
pt030731_POPTR_    M H K S N G K G S V G E V - - - - - K E G K G G G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G49770.1     D K N H E E E S P D H E I H I W T E R E R R K K M R D M F S K L H A L L P Q L P P K A D K S T I V D E A V S S I K S L E
pt030731_POPTR_    - - - - - - E S - D H E T H I W T E R E R R K K M R T M F S N L H A L L P Q L P P K A D K S T I V D E A M N Y I K T L Q
 
AT1G49770.1     Q T L Q K L E M Q K L E K L Q Y S S A S T N T T P T T T F A Y A P S S S S S P T A L L T P I S N H P I D A T A T D S Y P
pt030731_POPTR_    H T L Q K L Q K E K L E R L Q G A - - - - - - - - - T T F G Y E P S - - - - - - - L I A P - - - - - - - Q M Q A D S - -
 
AT1G49770.1     R A A F L A D Q V S S S S A A A A - - - N L P Y P C N D P I V N F D T W S S R N V V L T I C G N E A F F N L C V P K H K
pt030731_POPTR_    R E A F L A D Q V S S S N L A I S T T K S L P S V S R Y P V L - F Q T W T S S N V V L N I C G D E A Q I S I C S P K N -
 
AT1G49770.1     P G V F T S V C Y L F E K Y N M E V L F A N V S S N V F W S T Y V I Q A Q V N P S C E N Q L L G N G L G V V D V F K Q V
pt030731_POPTR_    P G L F T T I C Y V L E K H N V E V L S A H V S S D C S R S M Y M I Q A H L - - - - - - - - - - - - - - - - - - - - - -
 
AT1G49770.1     S Q E L V L Y F S S L - - - - - - -
pt030731_POPTR_    - - Q T Y I Y I V S K N Q F N L K A
 
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