fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003608 not found in 226aa AT1G49770.1 1st_1st 0.188183807 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49770.1     MTNAQELGQEGFMWGISNSDDSGGGCKRIEKEPLPSHPSHPSPEIQTTTVKKGKKRTKRN
gm003608_Glyma0 -MNKKRNRDQG---NITSGEGKGEKCR---------------------------------
                  * :.  ::*   .*:..:..*  *:                                 

AT1G49770.1     DKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLE
gm003608_Glyma0 ------ES-DHEMHIWTERERRKKMRNMFASLHALLPHLPSKADKSTVVDEAVAYIKNLE
                      ** ***:*************:**:.******:**.******:*****: **.**

AT1G49770.1     QTLQKLEMQKLEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYP
gm003608_Glyma0 KTLEKLEKQKQERVQ--CVSTFGCEPSMFVTGQGSSNN------NISNAIIGTTSN----
                :**:*** ** *::*  ..**    .: *. . .**..       ***  *.:*:.    

AT1G49770.1     RAAFLADQVSSSSAAAANLPYPCNDPIVNFD-TWSSRNVVLTICGNEAFFNLCVPKHKPG
gm003608_Glyma0 -----------------ALSFP-----VAFDKTWASANLVLNIFGDEAQFSICT-AHKPG
                                  *.:*     * ** **:* *:**.* *:** *.:*.  ****

AT1G49770.1     VFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQAQVNPSCENQLLGNGLGVVDVFKQVSQ
gm003608_Glyma0 LMTTIGFVLEKYKIEVITANISCIGYGNACMIQAH-GKRVSHQFL-DANSVEEIYKQAAG
                ::*:: :::***::**: **:*.  : .: :***: .   .:*:* :. .* :::**.: 

AT1G49770.1     ELVLYFSSL
gm003608_Glyma0 EIMLWIG--
                *::*::.
BoxShade v3.31 C (beta, 970507) Output
AT1G49770.1     M T N A Q E L G Q E G F M W G I S N S D D S G G G C K R I E K E P L P S H P S H P S P E I Q T T T V K K G K K R T K R N
gm003608_Glyma0    - M N K K R N R D Q G - - - N I T S G E G K G E K C R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G49770.1     D K N H E E E S P D H E I H I W T E R E R R K K M R D M F S K L H A L L P Q L P P K A D K S T I V D E A V S S I K S L E
gm003608_Glyma0    - - - - - - E S - D H E M H I W T E R E R R K K M R N M F A S L H A L L P H L P S K A D K S T V V D E A V A Y I K N L E
 
AT1G49770.1     Q T L Q K L E M Q K L E K L Q Y S S A S T N T T P T T T F A Y A P S S S S S P T A L L T P I S N H P I D A T A T D S Y P
gm003608_Glyma0    K T L E K L E K Q K Q E R V Q - - C V S T F G C E P S M F V T G Q G S S N N - - - - - - N I S N A I I G T T S N - - - -
 
AT1G49770.1     R A A F L A D Q V S S S S A A A A N L P Y P C N D P I V N F D - T W S S R N V V L T I C G N E A F F N L C V P K H K P G
gm003608_Glyma0    - - - - - - - - - - - - - - - - - A L S F P - - - - - V A F D K T W A S A N L V L N I F G D E A Q F S I C T - A H K P G
 
AT1G49770.1     V F T S V C Y L F E K Y N M E V L F A N V S S N V F W S T Y V I Q A Q V N P S C E N Q L L G N G L G V V D V F K Q V S Q
gm003608_Glyma0    L M T T I G F V L E K Y K I E V I T A N I S C I G Y G N A C M I Q A H - G K R V S H Q F L - D A N S V E E I Y K Q A A G
 
AT1G49770.1     E L V L Y F S S L
gm003608_Glyma0    E I M L W I G - -
 
0