fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49950.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021760 not found in 296aa AT1G49950.1 1st_not 0.545263157 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49950.2     MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA
pt021760_POPTR_ MGAPKQKWTAEEEAALKAGVIKHGAGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMV
                ********* ***:***:******.**********************************.

AT1G49950.2     NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSNP-P---PRR
pt021760_POPTR_ NGYGSREKPKLAPKRVHHVHRQDENLMSV-GTVQSDEDIPDAKA-LPVSSAALPVVNPKR
                **:*****.:** **.. : :*:** ::: .::****:  **.: * *** . *   *:*

AT1G49950.2     PNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVK
pt021760_POPTR_ TTVRLDNLIMEAITSLKEPGGSHKTAIASYIEEQYWPPNDFKRILSAKLKYLAANGKLIK
                ..****.******::******.:**:*.:***:** .* ****:**:*****:: ***:*

AT1G49950.2     VKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMKS
pt021760_POPTR_ VKRKYRIAPTSAFAERRVSPL-FFEGRQRI----SPKIERDDFNILTMSQIDLDLGKMRT
                *******. ::.::.:* . * .* *:**     *** : *:.*: * **** ::.:*::

AT1G49950.2     MNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEASKTLKGRNICKM
pt021760_POPTR_ MTAEQAAEVAARAVAEAEAAIAVAEEAAREAETAEADAEAAQAFAEAAMKTLKGRTAPK-
                *...:** ***:********:* *****:***:***:********* * ******.  * 

AT1G49950.2     MIRA
pt021760_POPTR_ TVRA
                 :**
BoxShade v3.31 C (beta, 970507) Output
AT1G49950.2     M G A P K Q K W T Q E E E S A L K S G V I K H G P G K W R T I L K D P E F S G V L Y L R S N V D L K D K W R N M S V M A
pt021760_POPTR_    M G A P K Q K W T A E E E A A L K A G V I K H G A G K W R T I L K D P E F S G V L Y L R S N V D L K D K W R N M S V M V
 
AT1G49950.2     N G W G S R E K S R L A V K R T F S L P K Q E E N S L A L T N S L Q S D E E N V D A T S G L Q V S S N P - P - - - P R R
pt021760_POPTR_    N G Y G S R E K P K L A P K R V H H V H R Q D E N L M S V - G T V Q S D E D I P D A K A - L P V S S A A L P V V N P K R
 
AT1G49950.2     P N V R L D S L I M E A I A T L K E P G G C N K T T I G A Y I E D Q Y H A P P D F K R L L S T K L K Y L T S C G K L V K
pt021760_POPTR_    T T V R L D N L I M E A I T S L K E P G G S H K T A I A S Y I E E Q Y W P P N D F K R I L S A K L K Y L A A N G K L I K
 
AT1G49950.2     V K R K Y R I P N S T P L S S H R R K G L G V F G G K Q R T S S L P S P K T D I D E V N F Q T R S Q I D T E I A R M K S
pt021760_POPTR_    V K R K Y R I A P T S A F A E R R V S P L - F F E G R Q R I - - - - S P K I E R D D F N I L T M S Q I D L D L G K M R T
 
AT1G49950.2     M N V H E A A A V A A Q A V A E A E A A M A E A E E A A K E A E A A E A E A E A A Q A F A E E A S K T L K G R N I C K M
pt021760_POPTR_    M T A E Q A A E V A A R A V A E A E A A I A V A E E A A R E A E T A E A D A E A A Q A F A E A A M K T L K G R T A P K -
 
AT1G49950.2     M I R A
pt021760_POPTR_    T V R A
 
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