fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49950.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020574 CCKTDGLRLMLLGLSG in 513/624 AT1G49950.1 1st_not 0.450526315 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49950.2     ----------MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLK
Sb020574_Sorbi1 AIVERRFGLRMGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLK
                          ******:**.***:**::*: :** *************..*  *******

AT1G49950.2     DKWRNMSVMANGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQS-DEENVD----ATSG
Sb020574_Sorbi1 DKWRNMNVIVSTSSSRDKAKTAVKRARTTPKNNEHTMAISRVTSDIDDEIVDEKHIAPLP
                ******.*:..  .**:*:: ****: : **::*:::*::.  .. *:* **    *.  

AT1G49950.2     LQVSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKL
Sb020574_Sorbi1 SEAKNTSYSKKSHSRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSDFDHLLSAKL
                 :..... .::.: ***.:***** .*:** *.::***. ***:** .*.**.:***:**

AT1G49950.2     KYLTSCGKLVKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSP-KTDIDEVNFQTR
Sb020574_Sorbi1 KDLSTSGKLIKVNRKYRIAPSSPNSEGRSPKMLLLEDVQR-----APVKIWSDDSKTLTR
                * *::.***:**:*****. *:* *. *   : :: . **     :* *   *: :  **

AT1G49950.2     SQIDTEIARMKSMNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEA
Sb020574_Sorbi1 SQVDAELARMSTMTAEEASVAAAHAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAA
                **:*:*:***.:*...**:..**:******* ***** ************:******* *

AT1G49950.2     SKTLKGRNICKMMIRA
Sb020574_Sorbi1 FLTLKNRNAAKLMA--
                  ***.** .*:*
BoxShade v3.31 C (beta, 970507) Output
AT1G49950.2     - - - - - - - - - - M G A P K Q K W T Q E E E S A L K S G V I K H G P G K W R T I L K D P E F S G V L Y L R S N V D L K
Sb020574_Sorbi1    A I V E R R F G L R M G A P K Q R W T S E E E A A L R A G I A R H G V G K W R T I L K D P E F S S T L C Y R S N V D L K
 
AT1G49950.2     D K W R N M S V M A N G W G S R E K S R L A V K R T F S L P K Q E E N S L A L T N S L Q S - D E E N V D - - - - A T S G
Sb020574_Sorbi1    D K W R N M N V I V S T S S S R D K A K T A V K R A R T T P K N N E H T M A I S R V T S D I D D E I V D E K H I A P L P
 
AT1G49950.2     L Q V S S N P P P R R P N V R L D S L I M E A I A T L K E P G G C N K T T I G A Y I E D Q Y H A P P D F K R L L S T K L
Sb020574_Sorbi1    S E A K N T S Y S K K S H S R L D N I I M E A I K N L N E P T G S H R T T I A N Y I E E Q Y W P P S D F D H L L S A K L
 
AT1G49950.2     K Y L T S C G K L V K V K R K Y R I P N S T P L S S H R R K G L G V F G G K Q R T S S L P S P - K T D I D E V N F Q T R
Sb020574_Sorbi1    K D L S T S G K L I K V N R K Y R I A P S S P N S E G R S P K M L L L E D V Q R - - - - - A P V K I W S D D S K T L T R
 
AT1G49950.2     S Q I D T E I A R M K S M N V H E A A A V A A Q A V A E A E A A M A E A E E A A K E A E A A E A E A E A A Q A F A E E A
Sb020574_Sorbi1    S Q V D A E L A R M S T M T A E E A S V A A A H A V A E A E A I M A E A E A A A K E A E A A E A E A Q A A Q A F A E A A
 
AT1G49950.2     S K T L K G R N I C K M M I R A
Sb020574_Sorbi1    F L T L K N R N A A K L M A - -
 
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