fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49950.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025351 not found in 509aa AT1G49950.1 not_not 0.416842105 III
Sb024718 not found in 458aa AT1G49950.1 not_not 0.410526315 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G49950.2     ----------MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLK
Sb025351_Sorbi1 -GFLGLDLQRMGAPKQRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSELLRLRSNVDLK
Sb024718_Sorbi1 LKRLGL---RMGAPKQRWTSEEEAALRAGVARHGVGNWRMILNDPELGSTLRYRSNVDLK
                          ******:** ***:**::** :** *:** **.*.::.  *  *******

AT1G49950.2     DKWRNMSVMANGWGSREKSRLAVKR-TFSLPKQEENSLALTNSLQSDEENVDATSGLQVS
Sb025351_Sorbi1 DKWRNLSVTAGGYGSREKARMALKKGKRVVPKLTAE------PMDIDGKDMDNAHDAAIE
Sb024718_Sorbi1 DKWRNMNVIVTSSSARDRGRTSTRR-TRAAPKNSDQSL----PMSTVTSDVD---DEIVD
                *****:.* . . .:*::.* : :: .   **   :      .:.   .::*   .  :.

AT1G49950.2     SNPPP--------------RRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPP
Sb025351_Sorbi1 AEPLA--MALEPLAIEESPDKSVARLDDLIFEAIRKLNEPSGSNKAAIAAYIEEQYWPPA
Sb024718_Sorbi1 VNPIASVVPVESWNTSNS-KKSHSRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPS
                 :* .               :.  ***.:*:*** .*:** *.::::*. ***:** .*.

AT1G49950.2     DFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTP----LSSHRR-----KGLGVFGGKQRT
Sb025351_Sorbi1 DFQRLLSTKLKSLVNSGKLIKVNQKFRIAQSSPPLGGISTKVS-----SAEGMNTGKNNA
Sb024718_Sorbi1 DFDHLLSAKLKDLATSGKLLKVNRKYRIAPSSPRLEGRSPKMMLLEDVQGEPLKLGSDAS
                **.:***:*** *...***:**::*:**. *:*     *.:       ..  :  *.: :

AT1G49950.2     SSLPSPKTDIDEVNFQTRSQIDTEIARMKSMNVHEAAAVAAQAVAEAEAAMAEAEEAAKE
Sb025351_Sorbi1 KRL-------------TKPQVVAELEKMKGMTKEEAAAFAAKAVAEAEVAIAEAEEAARV
Sb024718_Sorbi1 RTL-------------TRSQIDAELVRMATMTAEAAAAAAAHAVAEAEAIMAEAEAAARE
                  *             *:.*: :*: :*  *. . *** **:******. :**** **: 

AT1G49950.2     AEAAEAEAEAAQAFAEEASKTLKGRNICKMMIRA-
Sb025351_Sorbi1 AEAAENDAEAAKAFLDAVTLSMRSRNAASMMLRAC
Sb024718_Sorbi1 AEAAEAEARAAQAFAEAAVLTLKNRNAAKLMAQA-
                ***** :*.**:** : .  :::.** ..:* :*
BoxShade v3.31 C (beta, 970507) Output
AT1G49950.2     - - - - - - - - - - M G A P K Q K W T Q E E E S A L K S G V I K H G P G K W R T I L K D P E F S G V L Y L R S N V D L K
Sb025351_Sorbi1    - G F L G L D L Q R M G A P K Q R W T P E E E A A L K A G V A K H G P G K W R T I L R D S D F S E L L R L R S N V D L K
Sb024718_Sorbi1    L K R L G L - - - R M G A P K Q R W T S E E E A A L R A G V A R H G V G N W R M I L N D P E L G S T L R Y R S N V D L K
 
AT1G49950.2     D K W R N M S V M A N G W G S R E K S R L A V K R - T F S L P K Q E E N S L A L T N S L Q S D E E N V D A T S G L Q V S
Sb025351_Sorbi1    D K W R N L S V T A G G Y G S R E K A R M A L K K G K R V V P K L T A E - - - - - - P M D I D G K D M D N A H D A A I E
Sb024718_Sorbi1    D K W R N M N V I V T S S S A R D R G R T S T R R - T R A A P K N S D Q S L - - - - P M S T V T S D V D - - - D E I V D
 
AT1G49950.2     S N P P P - - - - - - - - - - - - - - R R P N V R L D S L I M E A I A T L K E P G G C N K T T I G A Y I E D Q Y H A P P
Sb025351_Sorbi1    A E P L A - - M A L E P L A I E E S P D K S V A R L D D L I F E A I R K L N E P S G S N K A A I A A Y I E E Q Y W P P A
Sb024718_Sorbi1    V N P I A S V V P V E S W N T S N S - K K S H S R L D N I I M E A I K N L N E P T G S H R T T I A N Y I E E Q Y W P P S
 
AT1G49950.2     D F K R L L S T K L K Y L T S C G K L V K V K R K Y R I P N S T P - - - - L S S H R R - - - - - K G L G V F G G K Q R T
Sb025351_Sorbi1    D F Q R L L S T K L K S L V N S G K L I K V N Q K F R I A Q S S P P L G G I S T K V S - - - - - S A E G M N T G K N N A
Sb024718_Sorbi1    D F D H L L S A K L K D L A T S G K L L K V N R K Y R I A P S S P R L E G R S P K M M L L E D V Q G E P L K L G S D A S
 
AT1G49950.2     S S L P S P K T D I D E V N F Q T R S Q I D T E I A R M K S M N V H E A A A V A A Q A V A E A E A A M A E A E E A A K E
Sb025351_Sorbi1    K R L - - - - - - - - - - - - - T K P Q V V A E L E K M K G M T K E E A A A F A A K A V A E A E V A I A E A E E A A R V
Sb024718_Sorbi1    R T L - - - - - - - - - - - - - T R S Q I D A E L V R M A T M T A E A A A A A A A H A V A E A E A I M A E A E A A A R E
 
AT1G49950.2     A E A A E A E A E A A Q A F A E E A S K T L K G R N I C K M M I R A -
Sb025351_Sorbi1    A E A A E N D A E A A K A F L D A V T L S M R S R N A A S M M L R A C
Sb024718_Sorbi1    A E A A E A E A R A A Q A F A E A A V L T L K N R N A A K L M A Q A -
 
0