fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49950.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020574 CCKTDGLRLMLLGLSG in 513/624 AT1G49950.1 1st_not 0.450526315 II
Sb025351 not found in 509aa AT1G49950.1 not_not 0.416842105 III
Sb024718 not found in 458aa AT1G49950.1 not_not 0.410526315 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G49950.2     -------------MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNV
Sb020574_Sorbi1 AIVERRFGL---RMGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNV
Sb025351_Sorbi1 ----GFLGLDLQRMGAPKQRWTPEEEAALKAGVAKHGPGKWRTILRDSDFSELLRLRSNV
Sb024718_Sorbi1 ---LKRLGL---RMGAPKQRWTSEEEAALRAGVARHGVGNWRMILNDPELGSTLRYRSNV
                             ******:** ***:**::*: :** *:** **.*.::.  *  ****

AT1G49950.2     DLKDKWRNMSVMANGWGSREKSRLAVKR-TFSLPKQEENSLALTNSLQSDEENV-DATSG
Sb020574_Sorbi1 DLKDKWRNMNVIVSTSSSRDKAKTAVKR-ARTTPKNNEHTMAISR-VTSDID---DEI--
Sb025351_Sorbi1 DLKDKWRNLSVTAGGYGSREKARMALKKGKRVVPKLTAEPMDID---GKDMDNAHDAA--
Sb024718_Sorbi1 DLKDKWRNMNVIVTSSSARDRGRTSTRR-TRAAPKNSDQSLPMST-VTSDVD---DEI--
                ********:.* .   .:*::.: : ::     **   ..: :     .* :   *    

AT1G49950.2     LQVSSNPP-------------PRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYH
Sb020574_Sorbi1 --VDEKHIAP-LPSEAKNTSYSKKSHSRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYW
Sb025351_Sorbi1 --IEAEPLAMALEPLAIEES-PDKSVARLDDLIFEAIRKLNEPSGSNKAAIAAYIEEQYW
Sb024718_Sorbi1 --VDVNPIASVVPVESWNTSNSKKSHSRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYW
                  :. :               . :.  ***.:*:*** .*:** *.::::*. ***:** 

AT1G49950.2     APPDFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSP
Sb020574_Sorbi1 PPSDFDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSEGRSPKMLLLEDVQRA----PV
Sb025351_Sorbi1 PPADFQRLLSTKLKSLVNSGKLIKVNQKFRIAQSSPPLGGISTKVSSAEG---------M
Sb024718_Sorbi1 PPSDFDHLLSAKLKDLATSGKLLKVNRKYRIAPSSPRLEGRSPKMMLLEDVQGE----PL
                .*.**.:***:*** * ..***:**::*:**. *:*        :    .          

AT1G49950.2     KTDIDEVNFQTRSQIDTEIARMKSMNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEA
Sb020574_Sorbi1 KIWSDDSKTLTRSQVDAELARMSTMTAEEASVAAAHAVAEAEAIMAEAEAAAKEAEAAEA
Sb025351_Sorbi1 NTGKNNAKRLTKPQVVAELEKMKGMTKEEAAAFAAKAVAEAEVAIAEAEEAARVAEAAEN
Sb024718_Sorbi1 KLGSDASRTLTRSQIDAELVRMATMTAEAAAAAAAHAVAEAEAIMAEAEAAAREAEAAEA
                :   :  .  *:.*: :*: :*  *. . *:. **:******. :**** **: ***** 

AT1G49950.2     EAEAAQAFAEEASKTLKGRNICKMMIRA-
Sb020574_Sorbi1 EAQAAQAFAEAAFLTLKNRNAAKLMA---
Sb025351_Sorbi1 DAEAAKAFLDAVTLSMRSRNAASMMLRAC
Sb024718_Sorbi1 EARAAQAFAEAAVLTLKNRNAAKLMAQA-
                :*.**:** : .  :::.** ..:*
BoxShade v3.31 C (beta, 970507) Output
AT1G49950.2     - - - - - - - - - - - - - M G A P K Q K W T Q E E E S A L K S G V I K H G P G K W R T I L K D P E F S G V L Y L R S N V
Sb020574_Sorbi1    A I V E R R F G L - - - R M G A P K Q R W T S E E E A A L R A G I A R H G V G K W R T I L K D P E F S S T L C Y R S N V
Sb025351_Sorbi1    - - - - G F L G L D L Q R M G A P K Q R W T P E E E A A L K A G V A K H G P G K W R T I L R D S D F S E L L R L R S N V
Sb024718_Sorbi1    - - - L K R L G L - - - R M G A P K Q R W T S E E E A A L R A G V A R H G V G N W R M I L N D P E L G S T L R Y R S N V
 
AT1G49950.2     D L K D K W R N M S V M A N G W G S R E K S R L A V K R - T F S L P K Q E E N S L A L T N S L Q S D E E N V - D A T S G
Sb020574_Sorbi1    D L K D K W R N M N V I V S T S S S R D K A K T A V K R - A R T T P K N N E H T M A I S R - V T S D I D - - - D E I - -
Sb025351_Sorbi1    D L K D K W R N L S V T A G G Y G S R E K A R M A L K K G K R V V P K L T A E P M D I D - - - G K D M D N A H D A A - -
Sb024718_Sorbi1    D L K D K W R N M N V I V T S S S A R D R G R T S T R R - T R A A P K N S D Q S L P M S T - V T S D V D - - - D E I - -
 
AT1G49950.2     L Q V S S N P P - - - - - - - - - - - - - P R R P N V R L D S L I M E A I A T L K E P G G C N K T T I G A Y I E D Q Y H
Sb020574_Sorbi1    - - V D E K H I A P - L P S E A K N T S Y S K K S H S R L D N I I M E A I K N L N E P T G S H R T T I A N Y I E E Q Y W
Sb025351_Sorbi1    - - I E A E P L A M A L E P L A I E E S - P D K S V A R L D D L I F E A I R K L N E P S G S N K A A I A A Y I E E Q Y W
Sb024718_Sorbi1    - - V D V N P I A S V V P V E S W N T S N S K K S H S R L D N I I M E A I K N L N E P T G S H R T T I A N Y I E E Q Y W
 
AT1G49950.2     A P P D F K R L L S T K L K Y L T S C G K L V K V K R K Y R I P N S T P L S S H R R K G L G V F G G K Q R T S S L P S P
Sb020574_Sorbi1    P P S D F D H L L S A K L K D L S T S G K L I K V N R K Y R I A P S S P N S E G R S P K M L L L E D V Q R A - - - - P V
Sb025351_Sorbi1    P P A D F Q R L L S T K L K S L V N S G K L I K V N Q K F R I A Q S S P P L G G I S T K V S S A E G - - - - - - - - - M
Sb024718_Sorbi1    P P S D F D H L L S A K L K D L A T S G K L L K V N R K Y R I A P S S P R L E G R S P K M M L L E D V Q G E - - - - P L
 
AT1G49950.2     K T D I D E V N F Q T R S Q I D T E I A R M K S M N V H E A A A V A A Q A V A E A E A A M A E A E E A A K E A E A A E A
Sb020574_Sorbi1    K I W S D D S K T L T R S Q V D A E L A R M S T M T A E E A S V A A A H A V A E A E A I M A E A E A A A K E A E A A E A
Sb025351_Sorbi1    N T G K N N A K R L T K P Q V V A E L E K M K G M T K E E A A A F A A K A V A E A E V A I A E A E E A A R V A E A A E N
Sb024718_Sorbi1    K L G S D A S R T L T R S Q I D A E L V R M A T M T A E A A A A A A A H A V A E A E A I M A E A E A A A R E A E A A E A
 
AT1G49950.2     E A E A A Q A F A E E A S K T L K G R N I C K M M I R A -
Sb020574_Sorbi1    E A Q A A Q A F A E A A F L T L K N R N A A K L M A - - -
Sb025351_Sorbi1    D A E A A K A F L D A V T L S M R S R N A A S M M L R A C
Sb024718_Sorbi1    E A R A A Q A F A E A A V L T L K N R N A A K L M A Q A -
 
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