fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G49950.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042107 not found in 295aa AT1G49950.1 1st_not 0.568421052 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G49950.2     MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA
gm042107_Glyma1 MGAPKQKWTAEEEQALKAGVVKHGVGKWRTILKDPEFSGVLYLRSNVDLKDKWRNLSVMA
                ********* ***.***:**:*** ******************************:****

AT1G49950.2     NGWGSREKSRLAVKRTFSLPKQEENSLALTNSLQSDEENVDATSGLQVSSN----PPPRR
gm042107_Glyma1 NGWSSREKSRLSVRRVHQVPRQDENSMAITPVVPSDEEIVDVKP-LQVSRDIVHIPGPK-
                ***.*******:*:*...:*:*:***:*:*  : **** **... **** :    * *: 

AT1G49950.2     PNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQYHAPPDFKRLLSTKLKYLTSCGKLVK
gm042107_Glyma1 ---SLDKLIMEAITSLKENGGSNKTAIAAFIEDQYWALPGLKSMLSAKLKFLTASGKLIK
                    **.******::*** **.***:*.*:***** * *.:* :**:***:**:.***:*

AT1G49950.2     VKRKYRIPNSTPLSSHRRKGLGVF-GGKQRTSSLPSPKTDIDEVNFQTRSQIDTEIARMK
gm042107_Glyma1 VNRKYRIAPIAAYSDRRRNSSMLYLKGRQKASM----KIDRDETNILTRSQIDLELEKIR
                *:*****.  :. *.:**:.  ::  *:*::*     * * **.*: ****** *: :::

AT1G49950.2     SMNVHEAAAVAAQAVAEAEAAMAEAEEAAKEAEAAEAEAEAAQAFAEEASKTLKGRNICK
gm042107_Glyma1 SMTPQEAAAFAARAVAEAEAAIAEAEEAAKEAEAAEADAEAAQAFADATTKSAKGRKSPK
                **. :****.**:********:***************:********: ::*: ***:  *

AT1G49950.2     MMIRA
gm042107_Glyma1 RIHT-
                 :
BoxShade v3.31 C (beta, 970507) Output
AT1G49950.2     M G A P K Q K W T Q E E E S A L K S G V I K H G P G K W R T I L K D P E F S G V L Y L R S N V D L K D K W R N M S V M A
gm042107_Glyma1    M G A P K Q K W T A E E E Q A L K A G V V K H G V G K W R T I L K D P E F S G V L Y L R S N V D L K D K W R N L S V M A
 
AT1G49950.2     N G W G S R E K S R L A V K R T F S L P K Q E E N S L A L T N S L Q S D E E N V D A T S G L Q V S S N - - - - P P P R R
gm042107_Glyma1    N G W S S R E K S R L S V R R V H Q V P R Q D E N S M A I T P V V P S D E E I V D V K P - L Q V S R D I V H I P G P K -
 
AT1G49950.2     P N V R L D S L I M E A I A T L K E P G G C N K T T I G A Y I E D Q Y H A P P D F K R L L S T K L K Y L T S C G K L V K
gm042107_Glyma1    - - - S L D K L I M E A I T S L K E N G G S N K T A I A A F I E D Q Y W A L P G L K S M L S A K L K F L T A S G K L I K
 
AT1G49950.2     V K R K Y R I P N S T P L S S H R R K G L G V F - G G K Q R T S S L P S P K T D I D E V N F Q T R S Q I D T E I A R M K
gm042107_Glyma1    V N R K Y R I A P I A A Y S D R R R N S S M L Y L K G R Q K A S M - - - - K I D R D E T N I L T R S Q I D L E L E K I R
 
AT1G49950.2     S M N V H E A A A V A A Q A V A E A E A A M A E A E E A A K E A E A A E A E A E A A Q A F A E E A S K T L K G R N I C K
gm042107_Glyma1    S M T P Q E A A A F A A R A V A E A E A A I A E A E E A A K E A E A A E A D A E A A Q A F A D A T T K S A K G R K S P K
 
AT1G49950.2     M M I R A
gm042107_Glyma1    R I H T -
 
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