fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50420.1 KMVHVIDLDASEPAQWLA at 167/482 in AT1G50420.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm019327 not found in 404aa AT1G50420.1 1st_1st 0.377985462 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50420.1     MVAMFQEDNGTSSVASSPLQVFSTMSLNRPTLLASSSPFHCLKDLKPEERGLYLIHLLLT
Sm019327_Selmo1 ---------ATATAPAPP-----------PS---------------SEERGLRLIHLLYL
                         .*::..:.*           *:               .***** *****  

AT1G50420.1     CANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNAT
Sm019327_Selmo1 CANAVASNDLQHANLFMEQLSGLASLTGDPMQRVATYFLEGLAARVTKSWPGLYKALYS-
                *** ***..**:**  :**** ***  **.***:*:** *.** *: ********** : 

AT1G50420.1     QTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLD---ASEPAQ
Sm019327_Selmo1 -TRLSSDSDIAAARHILFSVSPYLKFGYLTANQAILDAMQGEKVVHVVDLEVGGGNSVLQ
                 ** .. *:   .*:::*.: * **..** :*:***:**:***:***:**:   ...  *

AT1G50420.1     WLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCL
Sm019327_Selmo1 WLALLQAFSSRPEGPPHLRITAVNEKREVLALMGQKLTESAERLDIPFQFHPVAVSPAAL
                ********.************.*:.::***  *.::* *.**:*******:**.    .*

AT1G50420.1     NVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSA
Sm019327_Selmo1 ERDMLGVKSGEAVAVTSLMQLHSLLADEKE------------------------------
                : : * **:***:**:*::***::**.:.:                              

AT1G50420.1     AEARENDMSNNNGYSPSGDSASSLPLPSSGRTDS----FLNAIWGLSPKVMVVTEQDSDH
Sm019327_Selmo1 -----------DGKVRGGDVA---PREAKAGTSSTISRVLQLLHSLSPKIMVVVEQESNH
                           :*   .** *   *  :.. *.*    .*: : .****:***.**:*:*

AT1G50420.1     NGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRER
Sm019327_Selmo1 NGA-LHERFAPALHYYSAIFDSLDSTLPQHSSERITVERLIFGQEIRNIVACEGLERMER
                **: * **:  :*: *:*:**.*::.:*: *.:**.**:::**:**:**::***:** **

AT1G50420.1     HEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLY
Sm019327_Selmo1 HETLSSWKRRFEQAHFSSSLLSPTTAVQAERLLTIHSPDGYKLHREKGSLILCWQDTPML
                **.*..*.:*:: * *..  **  : :**.***   . ***:::.*.*. ::**** *: 

AT1G50420.1     SVSAWRCRK
Sm019327_Selmo1 SVSAWK---
                *****:
BoxShade v3.31 C (beta, 970507) Output
AT1G50420.1     M V A M F Q E D N G T S S V A S S P L Q V F S T M S L N R P T L L A S S S P F H C L K D L K P E E R G L Y L I H L L L T
Sm019327_Selmo1    - - - - - - - - - A T A T A P A P P - - - - - - - - - - - P S - - - - - - - - - - - - - - - S E E R G L R L I H L L Y L
 
AT1G50420.1     C A N H V A S G S L Q N A N A A L E Q L S H L A S P D G D T M Q R I A A Y F T E A L A N R I L K S W P G L Y K A L N A T
Sm019327_Selmo1    C A N A V A S N D L Q H A N L F M E Q L S G L A S L T G D P M Q R V A T Y F L E G L A A R V T K S W P G L Y K A L Y S -
 
AT1G50420.1     Q T R T N N V S E E I H V R R L F F E M F P I L K V S Y L L T N R A I L E A M E G E K M V H V I D L D - - - A S E P A Q
Sm019327_Selmo1    - T R L S S D S D I A A A R H I L F S V S P Y L K F G Y L T A N Q A I L D A M Q G E K V V H V V D L E V G G G N S V L Q
 
AT1G50420.1     W L A L L Q A F N S R P E G P P H L R I T G V H H Q K E V L E Q M A H R L I E E A E K L D I P F Q F N P V V S R L D C L
Sm019327_Selmo1    W L A L L Q A F S S R P E G P P H L R I T A V N E K R E V L A L M G Q K L T E S A E R L D I P F Q F H P V A V S P A A L
 
AT1G50420.1     N V E Q L R V K T G E A L A V S S V L Q L H T F L A S D D D L M R K N C A L R F Q N N P S G V D L Q R V L M M S H G S A
Sm019327_Selmo1    E R D M L G V K S G E A V A V T S L M Q L H S L L A D E K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G50420.1     A E A R E N D M S N N N G Y S P S G D S A S S L P L P S S G R T D S - - - - F L N A I W G L S P K V M V V T E Q D S D H
Sm019327_Selmo1    - - - - - - - - - - - D G K V R G G D V A - - - P R E A K A G T S S T I S R V L Q L L H S L S P K I M V V V E Q E S N H
 
AT1G50420.1     N G S T L M E R L L E S L Y T Y A A L F D C L E T K V P R T S Q D R I K V E K M L F G E E I K N I I S C E G F E R R E R
Sm019327_Selmo1    N G A - L H E R F A P A L H Y Y S A I F D S L D S T L P Q H S S E R I T V E R L I F G Q E I R N I V A C E G L E R M E R
 
AT1G50420.1     H E K L E K W S Q R I D L A G F G N V P L S Y Y A M L Q A R R L L Q G C G F D G Y R I K E E S G C A V I C W Q D R P L Y
Sm019327_Selmo1    H E T L S S W K R R F E Q A H F S S S L L S P T T A V Q A E R L L T I H S P D G Y K L H R E K G S L I L C W Q D T P M L
 
AT1G50420.1     S V S A W R C R K
Sm019327_Selmo1    S V S A W K - - -
 
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