fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50420.1 KMVHVIDLDASEPAQWLA at 167/482 in AT1G50420.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031487 KMVHIIDLNSFEPAQWIN in 161/476 AT1G50420.1 not_1st 0.620976116 II
Pt010299 KMVHIIDLNSSEPAQWIN in 160/476 AT1G50420.1 not_1st 0.600207684 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G50420.1     MVAMFQEDNGTSSVASSPLQVFSTMSLNRPTLLASSSPFHCLKDLKPEERGLYLIHLLLT
pt010299_POPTR_ MAGMVQEE-GSSSVTSPP-QFFPWMQLS-P---GIGSPYPWLRELKSEERGLCLIHLLLA
pt031487_POPTR_ MAGMAQEE-GSSSVTSSPLQFFPWMPLS-P---GTGSPYPWLRELKSEDRGLCLIHLLLA
                *..* **: *:***:*.* *.*. * *. *   . .**:  *::**.*:*** ******:

AT1G50420.1     CANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNAT
pt010299_POPTR_ CANHVAVGSVENANISLEHISHLASPDGDTMQRIAAYFTAALADRILKGWPGLHKALNPK
pt031487_POPTR_ CANHVAAGSIENANIGLEQISHLASPDGDTMQRIAAYFTAGLADRILKGWPGLHKALNPK
                ****** **::*** .**::******************* .**:****.****:****..

AT1G50420.1     QTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLA
pt010299_POPTR_ QVSL--ISEEILVQRLFFELCPFLKLSYVITNEAIIESMEGEKMVHIIDLNSSEPAQWIN
pt031487_POPTR_ QASL--ISEEILVQRLFFELFPFLKLSYVITNQAIIEAMEGEKMVHIIDLNSFEPAQWIN
                *.    :**** *:*****: *:**:**::**.**:*:********:***:: *****: 

AT1G50420.1     LLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVE
pt010299_POPTR_ LLQTLSARPEGPPHLRITGIHEKKEVLGQMALRLTEEAEKLDIPFQFNPIVSKLENLDLG
pt031487_POPTR_ LLQTLSARPEGPPHLRITGIHEQKEVLEQMALRLTEEAEKLDIPFQFNPIVSKLENLDLE
                ***::.:************:*.:**** *** ** **************:**:*: *:: 

AT1G50420.1     QLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHG--SAA
pt010299_POPTR_ NLRVKTGEALAVSSVLQLHALLAMDDEMHKRNSPSGSK-NPSSNHFQRVLRMNQNRHTLG
pt031487_POPTR_ NLRVKTGEALAVSSVLQLHTLLAMDDEMHRRNSPSGYK-NPNSNHFQRV-QINQNRRTLG
                :******************::** **:: ::*..   : **.. .:***  :.:.  : .

AT1G50420.1     EARENDMSNNNGYSPSGDSA-SSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGST
pt010299_POPTR_ EWLEKDLV--NVYSSSPDSALSPLSLSASPKMSSFLNALRSLSPKLLVITEQESNHNEFT
pt031487_POPTR_ DWLERDVV--NAYSSSPDSALSPLSLAASPKMGSFLNALRSLSPKLMVITEQESNHNGFN
                :  *.*:   * **.* *** *.*.*.:* : .*****: .****::*:***:*:**  .

AT1G50420.1     LMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKL
pt010299_POPTR_ LMERVTKALNFYAALFDCLESTVSRASLERHKVEKMLFGEEIKNIIACEGTERKERHEKL
pt031487_POPTR_ LMERVTEALNFYAALFDCLESTVSRVSLERHKVEKMLFGEEIKNIIACEGTDRKERHEKL
                ****: ::*  *********:.*.*.* :* ***************:*** :*:******

AT1G50420.1     EKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSA
pt010299_POPTR_ EKWILRLELAGFGSIPLSYHGRLQANRLLQSYGYDGYKIKEENGCLLICWQDRPLFSVSA
pt031487_POPTR_ EKWILRLELAGFGIIPLSYHGRLQANRFLQSYGYDGYKIKEENGCLVICWQDRPLFSVSA
                ***  *::***** :****:. ***.*:**. *:***:****.** :********:****

AT1G50420.1     WRCRK--
pt010299_POPTR_ WRFKRYD
pt031487_POPTR_ WRFRRYD
                ** ::
BoxShade v3.31 C (beta, 970507) Output
AT1G50420.1     M V A M F Q E D N G T S S V A S S P L Q V F S T M S L N R P T L L A S S S P F H C L K D L K P E E R G L Y L I H L L L T
pt010299_POPTR_    M A G M V Q E E - G S S S V T S P P - Q F F P W M Q L S - P - - - G I G S P Y P W L R E L K S E E R G L C L I H L L L A
pt031487_POPTR_    M A G M A Q E E - G S S S V T S S P L Q F F P W M P L S - P - - - G T G S P Y P W L R E L K S E D R G L C L I H L L L A
 
AT1G50420.1     C A N H V A S G S L Q N A N A A L E Q L S H L A S P D G D T M Q R I A A Y F T E A L A N R I L K S W P G L Y K A L N A T
pt010299_POPTR_    C A N H V A V G S V E N A N I S L E H I S H L A S P D G D T M Q R I A A Y F T A A L A D R I L K G W P G L H K A L N P K
pt031487_POPTR_    C A N H V A A G S I E N A N I G L E Q I S H L A S P D G D T M Q R I A A Y F T A G L A D R I L K G W P G L H K A L N P K
 
AT1G50420.1     Q T R T N N V S E E I H V R R L F F E M F P I L K V S Y L L T N R A I L E A M E G E K M V H V I D L D A S E P A Q W L A
pt010299_POPTR_    Q V S L - - I S E E I L V Q R L F F E L C P F L K L S Y V I T N E A I I E S M E G E K M V H I I D L N S S E P A Q W I N
pt031487_POPTR_    Q A S L - - I S E E I L V Q R L F F E L F P F L K L S Y V I T N Q A I I E A M E G E K M V H I I D L N S F E P A Q W I N
 
AT1G50420.1     L L Q A F N S R P E G P P H L R I T G V H H Q K E V L E Q M A H R L I E E A E K L D I P F Q F N P V V S R L D C L N V E
pt010299_POPTR_    L L Q T L S A R P E G P P H L R I T G I H E K K E V L G Q M A L R L T E E A E K L D I P F Q F N P I V S K L E N L D L G
pt031487_POPTR_    L L Q T L S A R P E G P P H L R I T G I H E Q K E V L E Q M A L R L T E E A E K L D I P F Q F N P I V S K L E N L D L E
 
AT1G50420.1     Q L R V K T G E A L A V S S V L Q L H T F L A S D D D L M R K N C A L R F Q N N P S G V D L Q R V L M M S H G - - S A A
pt010299_POPTR_    N L R V K T G E A L A V S S V L Q L H A L L A M D D E M H K R N S P S G S K - N P S S N H F Q R V L R M N Q N R H T L G
pt031487_POPTR_    N L R V K T G E A L A V S S V L Q L H T L L A M D D E M H R R N S P S G Y K - N P N S N H F Q R V - Q I N Q N R R T L G
 
AT1G50420.1     E A R E N D M S N N N G Y S P S G D S A - S S L P L P S S G R T D S F L N A I W G L S P K V M V V T E Q D S D H N G S T
pt010299_POPTR_    E W L E K D L V - - N V Y S S S P D S A L S P L S L S A S P K M S S F L N A L R S L S P K L L V I T E Q E S N H N E F T
pt031487_POPTR_    D W L E R D V V - - N A Y S S S P D S A L S P L S L A A S P K M G S F L N A L R S L S P K L M V I T E Q E S N H N G F N
 
AT1G50420.1     L M E R L L E S L Y T Y A A L F D C L E T K V P R T S Q D R I K V E K M L F G E E I K N I I S C E G F E R R E R H E K L
pt010299_POPTR_    L M E R V T K A L N F Y A A L F D C L E S T V S R A S L E R H K V E K M L F G E E I K N I I A C E G T E R K E R H E K L
pt031487_POPTR_    L M E R V T E A L N F Y A A L F D C L E S T V S R V S L E R H K V E K M L F G E E I K N I I A C E G T D R K E R H E K L
 
AT1G50420.1     E K W S Q R I D L A G F G N V P L S Y Y A M L Q A R R L L Q G C G F D G Y R I K E E S G C A V I C W Q D R P L Y S V S A
pt010299_POPTR_    E K W I L R L E L A G F G S I P L S Y H G R L Q A N R L L Q S Y G Y D G Y K I K E E N G C L L I C W Q D R P L F S V S A
pt031487_POPTR_    E K W I L R L E L A G F G I I P L S Y H G R L Q A N R F L Q S Y G Y D G Y K I K E E N G C L V I C W Q D R P L F S V S A
 
AT1G50420.1     W R C R K - -
pt010299_POPTR_    W R F K R Y D
pt031487_POPTR_    W R F R R Y D
 
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