fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50420.1 KMVHVIDLDASEPAQWLA at 167/482 in AT1G50420.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021857 not found in 470aa AT1G50420.1 1st_1st 0.701973001 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50420.1     MVAMFQEDNGTSSVASSPLQVFSTMSLNRPTLLASSSPFHCLKDLKPEERGLYLIHLLLT
pt021857_POPTR_ ---MYQDD-GSSSVTSSPLQVFSTMPVS-PSM---GSPYPWVRELKSEERGLYLIHLLLT
                   *:*:* *:***:**********.:. *::   .**:  :::**.*************

AT1G50420.1     CANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNAT
pt021857_POPTR_ CANHVASGSLENAEIALSQISHLASPDGDTMQRIAAYFAEALARRIVKAWPGIDKALNAT
                **********:**: **.*:******************:****.**:*:***: ******

AT1G50420.1     QTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLA
pt021857_POPTR_ QITL--VSEQILVRKLFYDMFPFMKVAFVLTNQAIIEAMEGEKMVHVIDLHAAEPAQWIA
                *     ***:* **:**::***::**:::***:**:**************.*:*****:*

AT1G50420.1     LLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVE
pt021857_POPTR_ LLQAFSVRPEGPPHLRITGIHPQKGVLDQMAHKLIEEAEKLDIPFQFNPIVSKLENLDIE
                *****. ************:* ** **:****:****************:**:*: *::*

AT1G50420.1     QLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSAAEA
pt021857_POPTR_ ILRVKTGEALAISSILQLHSFLASDDELRKKSPST--LKNSNGINMQRVLQMNQNTLGEL
                 **********:**:****:******:* :*. :    :*..*:::**** *.:.: .* 

AT1G50420.1     RENDMSNNNGYSPSGDSASSLPLPSSG--RTDSFLNAIWGLSPKVMVVTEQDSDHNGSTL
pt021857_POPTR_ LEKDTA--NGYSPSPDSASSSPLSSTASVKMDCFLNSLWGLSPKLMVVTEQDSNHNGSTL
                 *:* :  ****** ***** **.*:.  : *.***::******:********:******

AT1G50420.1     MERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLE
pt021857_POPTR_ MERLLEALYTYAALFDCLESTVSRTSMERLKVEKMLFGDEIKNIIACEGAARKERHEKLE
                ******:************:.*.*** :*:********:******:***  *:*******

AT1G50420.1     KWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAW
pt021857_POPTR_ KWIQRLDLAGFGNVSLSYYGMLQARRLLQGYGCDGYRMKEENGSVVICWQDRPLFSVSAW
                ** **:********.****.********** * ****:***.*..*********:*****

AT1G50420.1     RCRK
pt021857_POPTR_ RCRK
                ****
BoxShade v3.31 C (beta, 970507) Output
AT1G50420.1     M V A M F Q E D N G T S S V A S S P L Q V F S T M S L N R P T L L A S S S P F H C L K D L K P E E R G L Y L I H L L L T
pt021857_POPTR_    - - - M Y Q D D - G S S S V T S S P L Q V F S T M P V S - P S M - - - G S P Y P W V R E L K S E E R G L Y L I H L L L T
 
AT1G50420.1     C A N H V A S G S L Q N A N A A L E Q L S H L A S P D G D T M Q R I A A Y F T E A L A N R I L K S W P G L Y K A L N A T
pt021857_POPTR_    C A N H V A S G S L E N A E I A L S Q I S H L A S P D G D T M Q R I A A Y F A E A L A R R I V K A W P G I D K A L N A T
 
AT1G50420.1     Q T R T N N V S E E I H V R R L F F E M F P I L K V S Y L L T N R A I L E A M E G E K M V H V I D L D A S E P A Q W L A
pt021857_POPTR_    Q I T L - - V S E Q I L V R K L F Y D M F P F M K V A F V L T N Q A I I E A M E G E K M V H V I D L H A A E P A Q W I A
 
AT1G50420.1     L L Q A F N S R P E G P P H L R I T G V H H Q K E V L E Q M A H R L I E E A E K L D I P F Q F N P V V S R L D C L N V E
pt021857_POPTR_    L L Q A F S V R P E G P P H L R I T G I H P Q K G V L D Q M A H K L I E E A E K L D I P F Q F N P I V S K L E N L D I E
 
AT1G50420.1     Q L R V K T G E A L A V S S V L Q L H T F L A S D D D L M R K N C A L R F Q N N P S G V D L Q R V L M M S H G S A A E A
pt021857_POPTR_    I L R V K T G E A L A I S S I L Q L H S F L A S D D E L R K K S P S T - - L K N S N G I N M Q R V L Q M N Q N T L G E L
 
AT1G50420.1     R E N D M S N N N G Y S P S G D S A S S L P L P S S G - - R T D S F L N A I W G L S P K V M V V T E Q D S D H N G S T L
pt021857_POPTR_    L E K D T A - - N G Y S P S P D S A S S S P L S S T A S V K M D C F L N S L W G L S P K L M V V T E Q D S N H N G S T L
 
AT1G50420.1     M E R L L E S L Y T Y A A L F D C L E T K V P R T S Q D R I K V E K M L F G E E I K N I I S C E G F E R R E R H E K L E
pt021857_POPTR_    M E R L L E A L Y T Y A A L F D C L E S T V S R T S M E R L K V E K M L F G D E I K N I I A C E G A A R K E R H E K L E
 
AT1G50420.1     K W S Q R I D L A G F G N V P L S Y Y A M L Q A R R L L Q G C G F D G Y R I K E E S G C A V I C W Q D R P L Y S V S A W
pt021857_POPTR_    K W I Q R L D L A G F G N V S L S Y Y G M L Q A R R L L Q G Y G C D G Y R M K E E N G S V V I C W Q D R P L F S V S A W
 
AT1G50420.1     R C R K
pt021857_POPTR_    R C R K
 
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