fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50420.1 KMVHVIDLDASEPAQWLA at 167/482 in AT1G50420.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb009312 not found in 459aa AT1G50420.1 1st_1st 0.479750778 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50420.1     MVAMFQEDNGTSSVASSPLQVFSTMSLN-RPTLLASSSPFH---CLKDLKPEERGLYLIH
Sb009312_Sorbi1 ---MVQDEGSSSSVTSSSLHNFSTMPLHASPGAGAAASPTTPPWLARELRSDERGLCLIH
                   *.*::..:***:**.*: ****.*:  *   *::**       ::*:.:**** ***

AT1G50420.1     LLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKA
Sb009312_Sorbi1 LLLNCAAAAGAGRLDAANAALEHIAALASPDGDAMQRVAAAFAEALARRALRAWPGLCRA
                ***.**  ..:* *: ******::: *******:***:** *:****.* *::**** :*

AT1G50420.1     LNATQTRTNNVSEEIHV-RRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEP
Sb009312_Sorbi1 L--LLPRAGPTPAELAVARRHFLDLCPFLRLAGAAANQSVLEAMESEKIVHVVDLGGADA
                *    .*:. .. *: * ** *::: *:*:::   :*:::*****.**:***:**..::.

AT1G50420.1     AQWLALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLD
Sb009312_Sorbi1 TQWLELLHLLAARPEGPPHLRLTAVHEHRDVLTQTAMVLTKEAERLDVPFQFNPVVSRLE
                :*** **: : :*********:*.**.:::** * *  * :***:**:***********:

AT1G50420.1     CLNVEQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHG
Sb009312_Sorbi1 ALDVESLRVKTGEALAVTSSLQLHCLLASDDD-------------SSGKDGH------HH
                .*:**.***********:* **** :******             .** * :      * 

AT1G50420.1     SAAEARENDMSNNNGYSP-SGDSASSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHN
Sb009312_Sorbi1 QSSNGKGGD-TNKRPRSPESGVS------PSTSRADAFLGALWGLSPKVVVVTEQEASHN
                .:::.: .* :*:.  ** ** *      **:.*:*:**.*:*******:*****::.**

AT1G50420.1     GSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERH
Sb009312_Sorbi1 AAPLTERFVEALNYYAALFDCLESAAPRGSVERARVERWLLGEEVKNIVACDGADRRERH
                .:.* **::*:*  *********: .** * :* :**: *:***:***::*:* :*****

AT1G50420.1     EKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYS
Sb009312_Sorbi1 ERLDRWAARMEGAGFARVPLSYYALLQARRAAQGLGCDGFKVREEKGAFFLCWQDRAIFS
                *:*::*: *:: ***..*******:*****  ** * **::::**.*. .:*****.::*

AT1G50420.1     VSAWRCRK--
Sb009312_Sorbi1 VSAWRGRRFD
                ***** *:
BoxShade v3.31 C (beta, 970507) Output
AT1G50420.1     M V A M F Q E D N G T S S V A S S P L Q V F S T M S L N - R P T L L A S S S P F H - - - C L K D L K P E E R G L Y L I H
Sb009312_Sorbi1    - - - M V Q D E G S S S S V T S S S L H N F S T M P L H A S P G A G A A A S P T T P P W L A R E L R S D E R G L C L I H
 
AT1G50420.1     L L L T C A N H V A S G S L Q N A N A A L E Q L S H L A S P D G D T M Q R I A A Y F T E A L A N R I L K S W P G L Y K A
Sb009312_Sorbi1    L L L N C A A A A G A G R L D A A N A A L E H I A A L A S P D G D A M Q R V A A A F A E A L A R R A L R A W P G L C R A
 
AT1G50420.1     L N A T Q T R T N N V S E E I H V - R R L F F E M F P I L K V S Y L L T N R A I L E A M E G E K M V H V I D L D A S E P
Sb009312_Sorbi1    L - - L L P R A G P T P A E L A V A R R H F L D L C P F L R L A G A A A N Q S V L E A M E S E K I V H V V D L G G A D A
 
AT1G50420.1     A Q W L A L L Q A F N S R P E G P P H L R I T G V H H Q K E V L E Q M A H R L I E E A E K L D I P F Q F N P V V S R L D
Sb009312_Sorbi1    T Q W L E L L H L L A A R P E G P P H L R L T A V H E H R D V L T Q T A M V L T K E A E R L D V P F Q F N P V V S R L E
 
AT1G50420.1     C L N V E Q L R V K T G E A L A V S S V L Q L H T F L A S D D D L M R K N C A L R F Q N N P S G V D L Q R V L M M S H G
Sb009312_Sorbi1    A L D V E S L R V K T G E A L A V T S S L Q L H C L L A S D D D - - - - - - - - - - - - - S S G K D G H - - - - - - H H
 
AT1G50420.1     S A A E A R E N D M S N N N G Y S P - S G D S A S S L P L P S S G R T D S F L N A I W G L S P K V M V V T E Q D S D H N
Sb009312_Sorbi1    Q S S N G K G G D - T N K R P R S P E S G V S - - - - - - P S T S R A D A F L G A L W G L S P K V V V V T E Q E A S H N
 
AT1G50420.1     G S T L M E R L L E S L Y T Y A A L F D C L E T K V P R T S Q D R I K V E K M L F G E E I K N I I S C E G F E R R E R H
Sb009312_Sorbi1    A A P L T E R F V E A L N Y Y A A L F D C L E S A A P R G S V E R A R V E R W L L G E E V K N I V A C D G A D R R E R H
 
AT1G50420.1     E K L E K W S Q R I D L A G F G N V P L S Y Y A M L Q A R R L L Q G C G F D G Y R I K E E S G C A V I C W Q D R P L Y S
Sb009312_Sorbi1    E R L D R W A A R M E G A G F A R V P L S Y Y A L L Q A R R A A Q G L G C D G F K V R E E K G A F F L C W Q D R A I F S
 
AT1G50420.1     V S A W R C R K - -
Sb009312_Sorbi1    V S A W R G R R F D
 
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