fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50420.1 KMVHVIDLDASEPAQWLA at 167/482 in AT1G50420.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030378 not found in 455aa AT1G50420.1 1st_1st 0.625129802 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50420.1     MVAMFQEDNGTSSVASSPLQVFSTMSLNRPTLLASSSPFHCL-KDLKPEERGLYLIHLLL
gm030378_Glyma1 -----------------------MMSLS-PSL---GSPNNLLFREMKSEERGLYLIHLLL
                                        ***. *:*   .** : * :::*.************

AT1G50420.1     TCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNA
gm030378_Glyma1 TCANHVAAGNLENANTTLEQISLLASPDGDTMQRIATYFMESLADRILKTWPGIHRALNS
                *******:*.*:***::***:* *************:** *:**:****:***:::***:

AT1G50420.1     TQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWL
gm030378_Glyma1 --TRITLLSDEILVQKLFFELFPFLKVAFVLTNQAIIEAMEGEKVIHIIDLNAAEAAQWI
                  ** . :*:** *::****:**:***:::***:**:*******::*:***:*:*.***:

AT1G50420.1     ALLQAFNSRPEGPPHLRITGVHHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNV
gm030378_Glyma1 ALLQVLSGRPEGPPHLRITGVHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLDF
                ****.:..**************::**:*:*:**** *****************:*: *:.

AT1G50420.1     EQLRVKTGEALAVSSVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMMSHGSAAE
gm030378_Glyma1 DKLRVKTGEALAISSILQLHTLLAWDDETMQRKSPLLLKTS-NGIHLQRVLPMGQSTLGD
                ::**********:**:*****:** **: *:::..* ::.. .*:.***** *.:.: .:

AT1G50420.1     ARENDMSNNNGYSPSGDSASSLP----LPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNG
gm030378_Glyma1 LVEKDMV--NGYTLSPDSTSSSPASLTTSNSMNMESFLNALWGLSPKVMVVTEQDCNHNG
                  *:**   ***: * **:** *     ..* . :*****:**************.:***

AT1G50420.1     STLMERLLESLYTYAALFDCLETKVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHE
gm030378_Glyma1 PTLMDRLLEALYSFAALFDCLESTVSRTSLERLRVEKMLFGEEIKNIIACEGSERKERHE
                .***:****:**::********:.*.*** :*::**************:*** **:****

AT1G50420.1     KLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSV
gm030378_Glyma1 KLEKWFQRFDLAGFGNVPLSYFGMLQARRFLQSYGCEGYRMRDENGCVLICWEDRPMYSI
                ***** **:************:.******:**. * :***:::*.**.:***:***:**:

AT1G50420.1     SAWRCRK
gm030378_Glyma1 SAWRSRK
                ****.**
BoxShade v3.31 C (beta, 970507) Output
AT1G50420.1     M V A M F Q E D N G T S S V A S S P L Q V F S T M S L N R P T L L A S S S P F H C L - K D L K P E E R G L Y L I H L L L
gm030378_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - M M S L S - P S L - - - G S P N N L L F R E M K S E E R G L Y L I H L L L
 
AT1G50420.1     T C A N H V A S G S L Q N A N A A L E Q L S H L A S P D G D T M Q R I A A Y F T E A L A N R I L K S W P G L Y K A L N A
gm030378_Glyma1    T C A N H V A A G N L E N A N T T L E Q I S L L A S P D G D T M Q R I A T Y F M E S L A D R I L K T W P G I H R A L N S
 
AT1G50420.1     T Q T R T N N V S E E I H V R R L F F E M F P I L K V S Y L L T N R A I L E A M E G E K M V H V I D L D A S E P A Q W L
gm030378_Glyma1    - - T R I T L L S D E I L V Q K L F F E L F P F L K V A F V L T N Q A I I E A M E G E K V I H I I D L N A A E A A Q W I
 
AT1G50420.1     A L L Q A F N S R P E G P P H L R I T G V H H Q K E V L E Q M A H R L I E E A E K L D I P F Q F N P V V S R L D C L N V
gm030378_Glyma1    A L L Q V L S G R P E G P P H L R I T G V H Q K K E I L D Q V A H R L T E E A E K L D I P F Q F N P V V S K L E N L D F
 
AT1G50420.1     E Q L R V K T G E A L A V S S V L Q L H T F L A S D D D L M R K N C A L R F Q N N P S G V D L Q R V L M M S H G S A A E
gm030378_Glyma1    D K L R V K T G E A L A I S S I L Q L H T L L A W D D E T M Q R K S P L L L K T S - N G I H L Q R V L P M G Q S T L G D
 
AT1G50420.1     A R E N D M S N N N G Y S P S G D S A S S L P - - - - L P S S G R T D S F L N A I W G L S P K V M V V T E Q D S D H N G
gm030378_Glyma1    L V E K D M V - - N G Y T L S P D S T S S S P A S L T T S N S M N M E S F L N A L W G L S P K V M V V T E Q D C N H N G
 
AT1G50420.1     S T L M E R L L E S L Y T Y A A L F D C L E T K V P R T S Q D R I K V E K M L F G E E I K N I I S C E G F E R R E R H E
gm030378_Glyma1    P T L M D R L L E A L Y S F A A L F D C L E S T V S R T S L E R L R V E K M L F G E E I K N I I A C E G S E R K E R H E
 
AT1G50420.1     K L E K W S Q R I D L A G F G N V P L S Y Y A M L Q A R R L L Q G C G F D G Y R I K E E S G C A V I C W Q D R P L Y S V
gm030378_Glyma1    K L E K W F Q R F D L A G F G N V P L S Y F G M L Q A R R F L Q S Y G C E G Y R M R D E N G C V L I C W E D R P M Y S I
 
AT1G50420.1     S A W R C R K
gm030378_Glyma1    S A W R S R K
 
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