fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50600.1 NTNETELSLMLKDLET at 176/597 in AT1G50600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp021880 not found in 648aa AT1G50600.1 not_1st 0.443835616 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50600.1     -----------MRLSVFIIPLVESRQASGIINKQSTSLLIRFSLYLEASISTKSFFSKSQ
pp021880_Pp1s45 MSVQYEPELGSMVLTPGFPPGKEREYFSDTANSQQA------PNYFGARTS----YANDH
                           * *:  : *  * .  *.  *.*.:      . *: *  *    :::.:

AT1G50600.1     R-------ISQTQSPIC-----------------LSANY----YQPDNLDMEAT--QKHM
pp021880_Pp1s45 RQNAYGLKIKSHGSPISPLSPQDSSHAASDNGQRMSGGWNSASYQSESSSHSDTSLEGHV
                *       *..  ***.                 :*..:    **.:. . . *  : *:

AT1G50600.1     IQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLESSSGTKSHPCLNNKNNSSSTTSFSSNES
pp021880_Pp1s45 KQEEADYYGRQ----------------YGHIEQSEGSLAY-----HNSPSSVLKPMPYPG
                 ** :. : :*                *  :*.*.*: ::     :*..**. .  .  .

AT1G50600.1     PISQANN-NNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDN--
pp021880_Pp1s45 AIAQGYSMPNYQQDGRHVPDGQYAQSQSNCAQRN---PEMVHMLQVLENALLDDDDDDDH
                .*:*. .  * .: ..* *: :  .. *..:  *   .*:  **: **.*::: * *:  

AT1G50600.1     ----------------------------SYNNQGGFGQQH---------GVVSSAM----
pp021880_Pp1s45 RAPEGNWADTIEKFLAADNSAIKPSPVTSRTTQPDYGKQQCNENAINFTGAVTARVEELA
                                            * ..* .:*:*:         *.*:: :    

AT1G50600.1     YRSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGL
pp021880_Pp1s45 LQKLVVATRSRSEQLLVACAEAVSNNDMPLANVLIAQLNQEVSIHGDPMQRLAAYMVEGL
                 :.: : :*.  : :*  **:**.* *: ::: **:**:* **: *:*:***.***:***

AT1G50600.1     VARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFV
pp021880_Pp1s45 VARVAASGKSIYTSLKCKEPPTRDLLSAMQILYEVCPYFKFGYMAANGAIAEAFQNESRV
                ***:*:**.***.:*:**:*.  :**: *:****.******** :********.:*** *

AT1G50600.1     HIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAE
pp021880_Pp1s45 HIIDFQIAQGTQWTTLIRALAARPGGPPHVRITGIDDPMPGPTPNVGVEMVGKRLANLAE
                *******:** **.:*****.*******:********* .. : : *:*:**:**.:***

AT1G50600.1     MCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLV
pp021880_Pp1s45 AVGVPFVFHPVAKKGTEIEAWMLERQQGEALAVNFALQLHHMPDESVCTSNPRDRMLHMI
                  **** ** .*   **:*   *  ::********.* ********* ..* ***:*:::

AT1G50600.1     KHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLA
pp021880_Pp1s45 KGLNPKVMTLVEQESNTNTAPFFPRFLEALSYYSAIFESLDITLARESKERVNVEQQCLA
                * *.*:*:******:*******:***:*::.:* *:***:*:.***: ***:****:***

AT1G50600.1     REVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLE
pp021880_Pp1s45 RDIVNIIACEGIDRVERHEMMGKWRARLTMAGFRPYPLSQTVNNTIKTLLESYSDKYRLK
                *::**:*****::* **** :****:*: ****:*****. ** *** ******:** *:

AT1G50600.1     ERDGALYLGWKNQPLITSCAWR
pp021880_Pp1s45 EEGGALFLGWKNRPLIVSSAWH
                *..***:*****:***.*.**:
BoxShade v3.31 C (beta, 970507) Output
AT1G50600.1     - - - - - - - - - - - M R L S V F I I P L V E S R Q A S G I I N K Q S T S L L I R F S L Y L E A S I S T K S F F S K S Q
pp021880_Pp1s45    M S V Q Y E P E L G S M V L T P G F P P G K E R E Y F S D T A N S Q Q A - - - - - - P N Y F G A R T S - - - - Y A N D H
 
AT1G50600.1     R - - - - - - - I S Q T Q S P I C - - - - - - - - - - - - - - - - - L S A N Y - - - - Y Q P D N L D M E A T - - Q K H M
pp021880_Pp1s45    R Q N A Y G L K I K S H G S P I S P L S P Q D S S H A A S D N G Q R M S G G W N S A S Y Q S E S S S H S D T S L E G H V
 
AT1G50600.1     I Q E G S S M F Y H Q P S S V K Q M D L S V Q T F D S Y C T L E S S S G T K S H P C L N N K N N S S S T T S F S S N E S
pp021880_Pp1s45    K Q E E A D Y Y G R Q - - - - - - - - - - - - - - - - Y G H I E Q S E G S L A Y - - - - - H N S P S S V L K P M P Y P G
 
AT1G50600.1     P I S Q A N N - N N L S R F N N H S P E E N N N S P L S G S S A T N T N E T E L S L M L K D L E T A M M E P D V D N - -
pp021880_Pp1s45    A I A Q G Y S M P N Y Q Q D G R H V P D G Q Y A Q S Q S N C A Q R N - - - P E M V H M L Q V L E N A L L D D D D D D D H
 
AT1G50600.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Y N N Q G G F G Q Q H - - - - - - - - - G V V S S A M - - - -
pp021880_Pp1s45    R A P E G N W A D T I E K F L A A D N S A I K P S P V T S R T T Q P D Y G K Q Q C N E N A I N F T G A V T A R V E E L A
 
AT1G50600.1     Y R S M E M I S R G D L K G V L Y E C A K A V E N Y D L E M T D W L I S Q L Q Q M V S V S G E P V Q R L G A Y M L E G L
pp021880_Pp1s45    L Q K L V V A T R S R S E Q L L V A C A E A V S N N D M P L A N V L I A Q L N Q E V S I H G D P M Q R L A A Y M V E G L
 
AT1G50600.1     V A R L A S S G S S I Y K A L R C K D P T G P E L L T Y M H I L Y E A C P Y F K F G Y E S A N G A I A E A V K N E S F V
pp021880_Pp1s45    V A R V A A S G K S I Y T S L K C K E P P T R D L L S A M Q I L Y E V C P Y F K F G Y M A A N G A I A E A F Q N E S R V
 
AT1G50600.1     H I I D F Q I S Q G G Q W V S L I R A L G A R P G G P P N V R I T G I D D P R S S F A R Q G G L E L V G Q R L G K L A E
pp021880_Pp1s45    H I I D F Q I A Q G T Q W T T L I R A L A A R P G G P P H V R I T G I D D P M P G P T P N V G V E M V G K R L A N L A E
 
AT1G50600.1     M C G V P F E F H G A A L C C T E V E I E K L G V R N G E A L A V N F P L V L H H M P D E S V T V E N H R D R L L R L V
pp021880_Pp1s45    A V G V P F V F H P V A K K G T E I E A W M L E R Q Q G E A L A V N F A L Q L H H M P D E S V C T S N P R D R M L H M I
 
AT1G50600.1     K H L S P N V V T L V E Q E A N T N T A P F L P R F V E T M N H Y L A V F E S I D V K L A R D H K E R I N V E Q H C L A
pp021880_Pp1s45    K G L N P K V M T L V E Q E S N T N T A P F F P R F L E A L S Y Y S A I F E S L D I T L A R E S K E R V N V E Q Q C L A
 
AT1G50600.1     R E V V N L I A C E G V E R E E R H E P L G K W R S R F H M A G F K P Y P L S S Y V N A T I K G L L E S Y S E K Y T L E
pp021880_Pp1s45    R D I V N I I A C E G I D R V E R H E M M G K W R A R L T M A G F R P Y P L S Q T V N N T I K T L L E S Y S D K Y R L K
 
AT1G50600.1     E R D G A L Y L G W K N Q P L I T S C A W R
pp021880_Pp1s45    E E G G A L F L G W K N R P L I V S S A W H
 
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