fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50600.1 NTNETELSLMLKDLET at 176/597 in AT1G50600.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024008 not found in 736aa AT1G50600.1 1st_1st 0.473059360 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50600.1     MRLSVFIIPLVESRQASGIINKQSTSLLIRFSLYLEASISTKSFFSKSQRISQTQSPICL
Sb024008_Sorbi1 --TSMADTPTSRMVHPFGDVPRQ----------------TPKQFL-----YSGNSQHLCY
                   *:   *  .  :. * : :*                :.*.*:      * ... :* 

AT1G50600.1     SANYYQPDNLDMEATQKHMIQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLESSS---GTK
Sb024008_Sorbi1 P---YQ------SASDTHVVPQ-----------------------RHCTMRSHSPDAGSE
                .   **      .*::.*:: :                        :**:.* *   *::

AT1G50600.1     SHPCLNNKN---NSSSTTSFSSNESPISQA----NNNNLSRFNNHSPEEN-NNSPLSGSS
Sb024008_Sorbi1 DHD--NHKQYTLDSSATSGCSRHDSPSSQSVHAGSGSPVSLEDSHSGSTNGNGSPVSASC
                .*   *:*:   :**:*:. * ::** **:    ... :*  :.** . * *.**:*.*.

AT1G50600.1     ATNTNETELSLMLKDLETAMM--EPDVDNSYNNQGGFGQQHGVVSSAMYRSME------M
Sb024008_Sorbi1 VTE-DPTDLKQKLKDLEAAMLGTDPEIVNSLE-----------ISIADQLSLEPEEWKHM
                .*: : *:*.  *****:**:  :*:: ** :           :* *   *:*      *

AT1G50600.1     ISR--GDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARL
Sb024008_Sorbi1 MSMPGGNLKELLIACARAVEYNNSYAIDLMIPELRKKVSVSGEPLERLGAYMVEGLVARL
                :*   *:** :*  **:***  :    * :*.:*:: *******::******:*******

AT1G50600.1     ASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIID
Sb024008_Sorbi1 AASGSSIYKALKCKEPRSSDLLSYMHFLYEACPYFKFGYMSANGAIAEAVKGEDRIHIID
                *:*********:**:* ..:**:***:************ ***********.*. :****

AT1G50600.1     FQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGV
Sb024008_Sorbi1 FHIAQGAQWISLLQALAARPGGPPFVRITGIDDSVSAYARGGGLELVGRRLSHIAGLYKV
                *:*:**.**:**::**.******* ********. *::** *******:**.::* :  *

AT1G50600.1     PFEFHGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLS
Sb024008_Sorbi1 PFQFDAVAISSSEVEEGHLGIVPGEAVAVNFTLELHHIPDETVSTANHRDRILRLVKGLS
                **:*...*:..:***  :**:  ***:****.* ***:***:*:. *****:***** **

AT1G50600.1     PNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVV
Sb024008_Sorbi1 PKVLTLVEQESNTNTAPFAQRFAETLDYYTAIFESIDLALPRDDRERINIEQHCLAREIV
                *:*:******:*******  **.**:::* *:*****: *.**.:****:********:*

AT1G50600.1     NLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDG
Sb024008_Sorbi1 NLVACEGEERVERHEVFGKWKARLMMAGFRPSPLSALVNATIKTLLQSYSPDYKLAERDG
                **:**** ** **** :***::*: ****:* ***: ****** **:*** .*.* ****

AT1G50600.1     ALYLGWKNQPLITSCAWR
Sb024008_Sorbi1 VLYLGWKNRPLIVSSAWH
                .*******:***.*.**:
BoxShade v3.31 C (beta, 970507) Output
AT1G50600.1     M R L S V F I I P L V E S R Q A S G I I N K Q S T S L L I R F S L Y L E A S I S T K S F F S K S Q R I S Q T Q S P I C L
Sb024008_Sorbi1    - - T S M A D T P T S R M V H P F G D V P R Q - - - - - - - - - - - - - - - - T P K Q F L - - - - - Y S G N S Q H L C Y
 
AT1G50600.1     S A N Y Y Q P D N L D M E A T Q K H M I Q E G S S M F Y H Q P S S V K Q M D L S V Q T F D S Y C T L E S S S - - - G T K
Sb024008_Sorbi1    P - - - Y Q - - - - - - S A S D T H V V P Q - - - - - - - - - - - - - - - - - - - - - - - R H C T M R S H S P D A G S E
 
AT1G50600.1     S H P C L N N K N - - - N S S S T T S F S S N E S P I S Q A - - - - N N N N L S R F N N H S P E E N - N N S P L S G S S
Sb024008_Sorbi1    D H D - - N H K Q Y T L D S S A T S G C S R H D S P S S Q S V H A G S G S P V S L E D S H S G S T N G N G S P V S A S C
 
AT1G50600.1     A T N T N E T E L S L M L K D L E T A M M - - E P D V D N S Y N N Q G G F G Q Q H G V V S S A M Y R S M E - - - - - - M
Sb024008_Sorbi1    V T E - D P T D L K Q K L K D L E A A M L G T D P E I V N S L E - - - - - - - - - - - I S I A D Q L S L E P E E W K H M
 
AT1G50600.1     I S R - - G D L K G V L Y E C A K A V E N Y D L E M T D W L I S Q L Q Q M V S V S G E P V Q R L G A Y M L E G L V A R L
Sb024008_Sorbi1    M S M P G G N L K E L L I A C A R A V E Y N N S Y A I D L M I P E L R K K V S V S G E P L E R L G A Y M V E G L V A R L
 
AT1G50600.1     A S S G S S I Y K A L R C K D P T G P E L L T Y M H I L Y E A C P Y F K F G Y E S A N G A I A E A V K N E S F V H I I D
Sb024008_Sorbi1    A A S G S S I Y K A L K C K E P R S S D L L S Y M H F L Y E A C P Y F K F G Y M S A N G A I A E A V K G E D R I H I I D
 
AT1G50600.1     F Q I S Q G G Q W V S L I R A L G A R P G G P P N V R I T G I D D P R S S F A R Q G G L E L V G Q R L G K L A E M C G V
Sb024008_Sorbi1    F H I A Q G A Q W I S L L Q A L A A R P G G P P F V R I T G I D D S V S A Y A R G G G L E L V G R R L S H I A G L Y K V
 
AT1G50600.1     P F E F H G A A L C C T E V E I E K L G V R N G E A L A V N F P L V L H H M P D E S V T V E N H R D R L L R L V K H L S
Sb024008_Sorbi1    P F Q F D A V A I S S S E V E E G H L G I V P G E A V A V N F T L E L H H I P D E T V S T A N H R D R I L R L V K G L S
 
AT1G50600.1     P N V V T L V E Q E A N T N T A P F L P R F V E T M N H Y L A V F E S I D V K L A R D H K E R I N V E Q H C L A R E V V
Sb024008_Sorbi1    P K V L T L V E Q E S N T N T A P F A Q R F A E T L D Y Y T A I F E S I D L A L P R D D R E R I N I E Q H C L A R E I V
 
AT1G50600.1     N L I A C E G V E R E E R H E P L G K W R S R F H M A G F K P Y P L S S Y V N A T I K G L L E S Y S E K Y T L E E R D G
Sb024008_Sorbi1    N L V A C E G E E R V E R H E V F G K W K A R L M M A G F R P S P L S A L V N A T I K T L L Q S Y S P D Y K L A E R D G
 
AT1G50600.1     A L Y L G W K N Q P L I T S C A W R
Sb024008_Sorbi1    V L Y L G W K N R P L I V S S A W H
 
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