Input
| Putative repression domain
|
|
AT1G50640.1 |
NPPFQFDLNFPPLDCVD at 198/225 in AT1G50640.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm038668 |
RPPLPFDLNALPFDDDA in 197/222 |
AT1G50640.1 |
not_1st |
0.424778761 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G50640.1 MRRGRGSSAVAGPTVVAAINGSV-KEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDS
gm038668_Glyma1 MRKGRGGGASAA--AAAAVNGSVLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDS
**:***..* *. ..**:**** ** *:****************** ************
AT1G50640.1 AEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTD
gm038668_Glyma1 AEDAARAYDTAARNLRGSKAKTNFPLSPFCYQHPT-------------TDPFF-YAGFHD
**:******:*******.*******:.. . *. .***: : * *
AT1G50640.1 HQQQFPIVN-------RPTSSSMSSTVESFSGPRP-----TTMKP--ATTKRYPRTPPVV
gm038668_Glyma1 HQNNSNNNNDNLNNPQRPTSSGMSSTVESFSGPRPPTTTTTTTTPFLTTTRRYPRTPPLV
**:: * *****.************* ** .* :**:*******:*
AT1G50640.1 PEDCHSDCDSSSSVIDD-DDDIASSSRRRNPPFQFDLNFPPLD----CVDLFNGADDLHC
gm038668_Glyma1 PEDCHSDCDSSSSVVDDSDDNIVSSSFR--PPLPFDLNALPFDDDAAVVD-----DDLRC
**************:** **:*.*** * **: **** *:* ** ***:*
AT1G50640.1 TDLRL
gm038668_Glyma1 TALCL
* * *
BoxShade v3.31 C (beta, 970507) Output
AT1G50640.1 |
M |
R |
R |
G |
R |
G |
S |
S |
A |
V |
A |
G |
P |
T |
V |
V |
A |
A |
I |
N |
G |
S |
V |
- |
K |
E |
I |
R |
F |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
W |
K |
K |
A |
R |
V |
W |
L |
G |
T |
F |
D |
S |
gm038668_Glyma1 |
M |
R |
K |
G |
R |
G |
G |
G |
A |
S |
A |
A |
- |
- |
A |
A |
A |
A |
V |
N |
G |
S |
V |
L |
K |
E |
P |
R |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
L |
K |
K |
A |
R |
V |
W |
L |
G |
T |
F |
D |
S |
|
AT1G50640.1 |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
S |
A |
A |
R |
N |
L |
R |
G |
P |
K |
A |
K |
T |
N |
F |
P |
I |
D |
S |
S |
S |
P |
P |
P |
P |
N |
L |
R |
F |
N |
Q |
I |
R |
N |
Q |
N |
Q |
N |
Q |
V |
D |
P |
F |
M |
D |
H |
R |
L |
F |
T |
D |
gm038668_Glyma1 |
A |
E |
D |
A |
A |
R |
A |
Y |
D |
T |
A |
A |
R |
N |
L |
R |
G |
S |
K |
A |
K |
T |
N |
F |
P |
L |
S |
P |
F |
C |
Y |
Q |
H |
P |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
D |
P |
F |
F |
- |
Y |
A |
G |
F |
H |
D |
|
AT1G50640.1 |
H |
Q |
Q |
Q |
F |
P |
I |
V |
N |
- |
- |
- |
- |
- |
- |
- |
R |
P |
T |
S |
S |
S |
M |
S |
S |
T |
V |
E |
S |
F |
S |
G |
P |
R |
P |
- |
- |
- |
- |
- |
T |
T |
M |
K |
P |
- |
- |
A |
T |
T |
K |
R |
Y |
P |
R |
T |
P |
P |
V |
V |
gm038668_Glyma1 |
H |
Q |
N |
N |
S |
N |
N |
N |
N |
D |
N |
L |
N |
N |
P |
Q |
R |
P |
T |
S |
S |
G |
M |
S |
S |
T |
V |
E |
S |
F |
S |
G |
P |
R |
P |
P |
T |
T |
T |
T |
T |
T |
T |
T |
P |
F |
L |
T |
T |
T |
R |
R |
Y |
P |
R |
T |
P |
P |
L |
V |
|
AT1G50640.1 |
P |
E |
D |
C |
H |
S |
D |
C |
D |
S |
S |
S |
S |
V |
I |
D |
D |
- |
D |
D |
D |
I |
A |
S |
S |
S |
R |
R |
R |
N |
P |
P |
F |
Q |
F |
D |
L |
N |
F |
P |
P |
L |
D |
- |
- |
- |
- |
C |
V |
D |
L |
F |
N |
G |
A |
D |
D |
L |
H |
C |
gm038668_Glyma1 |
P |
E |
D |
C |
H |
S |
D |
C |
D |
S |
S |
S |
S |
V |
V |
D |
D |
S |
D |
D |
N |
I |
V |
S |
S |
S |
F |
R |
- |
- |
P |
P |
L |
P |
F |
D |
L |
N |
A |
L |
P |
F |
D |
D |
D |
A |
A |
V |
V |
D |
- |
- |
- |
- |
- |
D |
D |
L |
R |
C |
|
AT1G50640.1 |
T |
D |
L |
R |
L |
gm038668_Glyma1 |
T |
A |
L |
C |
L |
|
|