fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50640.1 NPPFQFDLNFPPLDCVD at 198/225 in AT1G50640.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026911 PVPLPFDLNLPPGGGGC in 217/356 AT1G50640.1 1st_1st 0.289085545 Ib
TMITICLNLGLICMLA in 300/356
Gm023109 REPLPFDLNALPLDDAD in 186/210 AT1G50640.1 1st_1st 0.436578171 Ia
Gm038668 RPPLPFDLNALPFDDDA in 197/222 AT1G50640.1 not_1st 0.424778761 II
Gm049039 REPLPFDLNVLPLDDAD in 188/212 AT3G20310.1 not_not 0.418879056 III
Pt030795 RKPLPFDLNFPPLDQVD in 194/219 AT1G50640.1 1st_1st 0.430678466 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G50640.1     ---MRRGRGSSAVAGPTVVAAINGS--------VKEIRFRGVRKRPWGRFAAEIRDPWKK
gm038668_Glyma1 ---MRKGRGGGASAAAA--AAVNGS-------VLKEPRYRGVRKRPWGRFAAEIRDPLKK
pt030795_POPTR_ -----MGRTRTTTKQA---VDPNGSATQNMLVIAKEPRYRGVRKRPWGRFAAEIRDPWKK
gm049039_Glyma1 -----MGRGGTAAAAVE--IAEPGSRP----VFFKEPRYRGVRKRPWGRFAAEIRDPLKK
gm023109_Glyma0 -----MGRGGTAAAAAE--VAEPGLRP----VYFKEQRYRGVRKRPWGRFAAEIRDPLKK
Sb026911_Sorbi1 SGGMRRGGGVAAAAEAD------GD---------VESRFRGVRKRPWGRYAAEIRDPAKK
                      *    :           *           * *:**********:******* **

AT1G50640.1     ARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQ--
gm038668_Glyma1 ARVWLGTFDSAEDAARAYDTAARNLRGSKAKTNFPLS-----PF--CYQH-------PT-
pt030795_POPTR_ TRVWLGTFDSAEDAARAYDAAARTLRGAKAKTNFPIS-----TTNQLFNHQ-NQNQSP--
gm049039_Glyma1 ARVWLGTFDTAEEAARAYDTAARTLRGPKAKTNFPLS-----PP--FY-H-------P--
gm023109_Glyma0 ARVWLGTFDTAEEAARAYDTAARTLRGPKAKTNFPLS-----PP--FY-H-------P--
Sb026911_Sorbi1 ARVWLGTFDSAEDAARAYDAAARMLRGPKARTNFPL------PAAAAHHHL----HMPAA
                :********:**:******:*** ***.**:****:      .    . :          

AT1G50640.1     ----VDP-----FMDHRLF--TDHQQQFPIVNRPTSSSMSSTVESFSGPRP-----TTMK
gm038668_Glyma1 ----TDPFFYAGFHDHQNNS-NNNNDNLNNPQRPTSSGMSSTVESFSGPRPPTTTTTTTT
pt030795_POPTR_ ----TDP-----FLDHHSI----------NPQRPTSSSLSSTVESFSGPRPPQPTTTTKS
gm049039_Glyma1 -----DP-----FSDHRYFDGAGAGEDFQDHRRPTSSGMSSTVESFSGPR---AAVPAKA
gm023109_Glyma0 -----DP-----FSDHRHF--ANTGEDFHDHRRPTSSGMSSTVESFSGPR---AAVPATA
Sb026911_Sorbi1 AAAAAAP-----YTTYP----NATGVSTPPVARPACSSLSSTVESFGGARPR----PVLP
                      *     :  :                **:.*.:*******.*.*      ..  

AT1G50640.1     P--ATTKRYPRTPPVVPEDCHSDCDSSSSVIDDDD--DIASSSRRRNPPFQFDLNFPPL-
gm038668_Glyma1 PFLTTTRRYPRTPPLVPEDCHSDCDSSSSVVDDSD-DNIVSSSFR--PPLPFDLNALPFD
pt030795_POPTR_ G-NGPRRSHPRIPPVVPEDCHSDCDSSSSVVDDRDVASAASSLCR--KPLPFDLNFPPL-
gm049039_Glyma1 P-VIVNRRYPRTPPVVPEDCRSDCDSSSSVVDDGDGDNVASSFRR--EPLPFDLNVLPL-
gm023109_Glyma0 P-VATGRRYPRTPPVIPEDCRSDCDSSSSVVDDGEGDNVASSFPR--EPLPFDLNALPL-
Sb026911_Sorbi1 P-------RPLPPPIPDGDCRSDCGSSASVVDDDCTDAAASPSCP--VPLPFDLNLPPGG
                         *  **:   **:***.**:**:**      .*.      *: ****  *  

AT1G50640.1     DCVDLFNG-----ADDLHCTDLRL
gm038668_Glyma1 DDAAVVD-------DDLRCTALCL
pt030795_POPTR_ DQVDLGSG------DDLHCTALCL
gm049039_Glyma1 DDADVAT-------DDLFCTVLCL
gm023109_Glyma0 DDADVAT-------DDLFCTVLCL
Sb026911_Sorbi1 GGCGAGVGLYADEEDELRLTALRL
                .             *:*  * * *
BoxShade v3.31 C (beta, 970507) Output
AT1G50640.1     - - - M R R G R G S S A V A G P T V V A A I N G S - - - - - - - - V K E I R F R G V R K R P W G R F A A E I R D P W K K
gm038668_Glyma1    - - - M R K G R G G G A S A A A A - - A A V N G S - - - - - - - V L K E P R Y R G V R K R P W G R F A A E I R D P L K K
pt030795_POPTR_    - - - - - M G R T R T T T K Q A - - - V D P N G S A T Q N M L V I A K E P R Y R G V R K R P W G R F A A E I R D P W K K
gm049039_Glyma1    - - - - - M G R G G T A A A A V E - - I A E P G S R P - - - - V F F K E P R Y R G V R K R P W G R F A A E I R D P L K K
gm023109_Glyma0    - - - - - M G R G G T A A A A A E - - V A E P G L R P - - - - V Y F K E Q R Y R G V R K R P W G R F A A E I R D P L K K
Sb026911_Sorbi1    S G G M R R G G G V A A A A E A D - - - - - - G D - - - - - - - - - V E S R F R G V R K R P W G R Y A A E I R D P A K K
 
AT1G50640.1     A R V W L G T F D S A E E A A R A Y D S A A R N L R G P K A K T N F P I D S S S P P P P N L R F N Q I R N Q N Q N Q - -
gm038668_Glyma1    A R V W L G T F D S A E D A A R A Y D T A A R N L R G S K A K T N F P L S - - - - - P F - - C Y Q H - - - - - - - P T -
pt030795_POPTR_    T R V W L G T F D S A E D A A R A Y D A A A R T L R G A K A K T N F P I S - - - - - T T N Q L F N H Q - N Q N Q S P - -
gm049039_Glyma1    A R V W L G T F D T A E E A A R A Y D T A A R T L R G P K A K T N F P L S - - - - - P P - - F Y - H - - - - - - - P - -
gm023109_Glyma0    A R V W L G T F D T A E E A A R A Y D T A A R T L R G P K A K T N F P L S - - - - - P P - - F Y - H - - - - - - - P - -
Sb026911_Sorbi1    A R V W L G T F D S A E D A A R A Y D A A A R M L R G P K A R T N F P L - - - - - - P A A A A H H H L - - - - H M P A A
 
AT1G50640.1     - - - - V D P - - - - - F M D H R L F - - T D H Q Q Q F P I V N R P T S S S M S S T V E S F S G P R P - - - - - T T M K
gm038668_Glyma1    - - - - T D P F F Y A G F H D H Q N N S - N N N N D N L N N P Q R P T S S G M S S T V E S F S G P R P P T T T T T T T T
pt030795_POPTR_    - - - - T D P - - - - - F L D H H S I - - - - - - - - - - N P Q R P T S S S L S S T V E S F S G P R P P Q P T T T T K S
gm049039_Glyma1    - - - - - D P - - - - - F S D H R Y F D G A G A G E D F Q D H R R P T S S G M S S T V E S F S G P R - - - A A V P A K A
gm023109_Glyma0    - - - - - D P - - - - - F S D H R H F - - A N T G E D F H D H R R P T S S G M S S T V E S F S G P R - - - A A V P A T A
Sb026911_Sorbi1    A A A A A A P - - - - - Y T T Y P - - - - N A T G V S T P P V A R P A C S S L S S T V E S F G G A R P R - - - - P V L P
 
AT1G50640.1     P - - A T T K R Y P R T P P V V P E D C H S D C D S S S S V I D D D D - - D I A S S S R R R N P P F Q F D L N F P P L -
gm038668_Glyma1    P F L T T T R R Y P R T P P L V P E D C H S D C D S S S S V V D D S D - D N I V S S S F R - - P P L P F D L N A L P F D
pt030795_POPTR_    G - N G P R R S H P R I P P V V P E D C H S D C D S S S S V V D D R D V A S A A S S L C R - - K P L P F D L N F P P L -
gm049039_Glyma1    P - V I V N R R Y P R T P P V V P E D C R S D C D S S S S V V D D G D G D N V A S S F R R - - E P L P F D L N V L P L -
gm023109_Glyma0    P - V A T G R R Y P R T P P V I P E D C R S D C D S S S S V V D D G E G D N V A S S F P R - - E P L P F D L N A L P L -
Sb026911_Sorbi1    P - - - - - - - R P L P P P I P D G D C R S D C G S S A S V V D D D C T D A A A S P S C P - - V P L P F D L N L P P G G
 
AT1G50640.1     D C V D L F N G - - - - - A D D L H C T D L R L
gm038668_Glyma1    D D A A V V D - - - - - - - D D L R C T A L C L
pt030795_POPTR_    D Q V D L G S G - - - - - - D D L H C T A L C L
gm049039_Glyma1    D D A D V A T - - - - - - - D D L F C T V L C L
gm023109_Glyma0    D D A D V A T - - - - - - - D D L F C T V L C L
Sb026911_Sorbi1    G G C G A G V G L Y A D E E D E L R L T A L R L
 
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