fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50640.1 NPPFQFDLNFPPLDCVD at 198/225 in AT1G50640.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026911 PVPLPFDLNLPPGGGGC in 217/356 AT1G50640.1 1st_1st 0.289085545 Ib
TMITICLNLGLICMLA in 300/356
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50640.1     ---MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTF
Sb026911_Sorbi1 SGGMRRGGGVAA------AAEADGDV-ESRFRGVRKRPWGRYAAEIRDPAKKARVWLGTF
                   **** * :*      .*  :*.* * ************:******* **********

AT1G50640.1     DSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRL-
Sb026911_Sorbi1 DSAEDAARAYDAAARMLRGPKARTNFPLPAAAA----------------------HHHLH
                ****:******:*** ******:****: :::.                      .*:* 

AT1G50640.1     -----------FTDHQQ----QFPIVNRPTSSSMSSTVESFSGPRPTTMKPATTKRYPRT
Sb026911_Sorbi1 MPAAAAAAAAPYTTYPNATGVSTPPVARPACSSLSSTVESFGGARPRPVLP------PRP
                           :* : :    . * * **:.**:*******.*.** .: *      **.

AT1G50640.1     -PPVVPE-DCHSDCDSSSSVIDDDDDIASSSRRRNPPFQFDLNFPP--LDC---VDLF-N
Sb026911_Sorbi1 LPPPIPDGDCRSDCGSSASVVDDDCTDAAASPSCPVPLPFDLNLPPGGGGCGAGVGLYAD
                 ** :*: **:***.**:**:***   *::*     *: ****:**   .*   *.*: :

AT1G50640.1     GADDLHCTDLRL
Sb026911_Sorbi1 EEDELRLTALRL
                  *:*: * ***
BoxShade v3.31 C (beta, 970507) Output
AT1G50640.1     - - - M R R G R G S S A V A G P T V V A A I N G S V K E I R F R G V R K R P W G R F A A E I R D P W K K A R V W L G T F
Sb026911_Sorbi1    S G G M R R G G G V A A - - - - - - A A E A D G D V - E S R F R G V R K R P W G R Y A A E I R D P A K K A R V W L G T F
 
AT1G50640.1     D S A E E A A R A Y D S A A R N L R G P K A K T N F P I D S S S P P P P N L R F N Q I R N Q N Q N Q V D P F M D H R L -
Sb026911_Sorbi1    D S A E D A A R A Y D A A A R M L R G P K A R T N F P L P A A A A - - - - - - - - - - - - - - - - - - - - - - H H H L H
 
AT1G50640.1     - - - - - - - - - - - F T D H Q Q - - - - Q F P I V N R P T S S S M S S T V E S F S G P R P T T M K P A T T K R Y P R T
Sb026911_Sorbi1    M P A A A A A A A A P Y T T Y P N A T G V S T P P V A R P A C S S L S S T V E S F G G A R P R P V L P - - - - - - P R P
 
AT1G50640.1     - P P V V P E - D C H S D C D S S S S V I D D D D D I A S S S R R R N P P F Q F D L N F P P - - L D C - - - V D L F - N
Sb026911_Sorbi1    L P P P I P D G D C R S D C G S S A S V V D D D C T D A A A S P S C P V P L P F D L N L P P G G G G C G A G V G L Y A D
 
AT1G50640.1     G A D D L H C T D L R L
Sb026911_Sorbi1    E E D E L R L T A L R L
 
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