Input
| Putative repression domain
|
|
AT1G50640.1 |
NPPFQFDLNFPPLDCVD at 198/225 in AT1G50640.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb026911 |
PVPLPFDLNLPPGGGGC in 217/356 |
AT1G50640.1 |
1st_1st |
0.289085545 |
Ib |
TMITICLNLGLICMLA in 300/356 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G50640.1 ---MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTF
Sb026911_Sorbi1 SGGMRRGGGVAA------AAEADGDV-ESRFRGVRKRPWGRYAAEIRDPAKKARVWLGTF
**** * :* .* :*.* * ************:******* **********
AT1G50640.1 DSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRL-
Sb026911_Sorbi1 DSAEDAARAYDAAARMLRGPKARTNFPLPAAAA----------------------HHHLH
****:******:*** ******:****: :::. .*:*
AT1G50640.1 -----------FTDHQQ----QFPIVNRPTSSSMSSTVESFSGPRPTTMKPATTKRYPRT
Sb026911_Sorbi1 MPAAAAAAAAPYTTYPNATGVSTPPVARPACSSLSSTVESFGGARPRPVLP------PRP
:* : : . * * **:.**:*******.*.** .: * **.
AT1G50640.1 -PPVVPE-DCHSDCDSSSSVIDDDDDIASSSRRRNPPFQFDLNFPP--LDC---VDLF-N
Sb026911_Sorbi1 LPPPIPDGDCRSDCGSSASVVDDDCTDAAASPSCPVPLPFDLNLPPGGGGCGAGVGLYAD
** :*: **:***.**:**:*** *::* *: ****:** .* *.*: :
AT1G50640.1 GADDLHCTDLRL
Sb026911_Sorbi1 EEDELRLTALRL
*:*: * ***
BoxShade v3.31 C (beta, 970507) Output
AT1G50640.1 |
- |
- |
- |
M |
R |
R |
G |
R |
G |
S |
S |
A |
V |
A |
G |
P |
T |
V |
V |
A |
A |
I |
N |
G |
S |
V |
K |
E |
I |
R |
F |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
W |
K |
K |
A |
R |
V |
W |
L |
G |
T |
F |
Sb026911_Sorbi1 |
S |
G |
G |
M |
R |
R |
G |
G |
G |
V |
A |
A |
- |
- |
- |
- |
- |
- |
A |
A |
E |
A |
D |
G |
D |
V |
- |
E |
S |
R |
F |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
A |
K |
K |
A |
R |
V |
W |
L |
G |
T |
F |
|
AT1G50640.1 |
D |
S |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
S |
A |
A |
R |
N |
L |
R |
G |
P |
K |
A |
K |
T |
N |
F |
P |
I |
D |
S |
S |
S |
P |
P |
P |
P |
N |
L |
R |
F |
N |
Q |
I |
R |
N |
Q |
N |
Q |
N |
Q |
V |
D |
P |
F |
M |
D |
H |
R |
L |
- |
Sb026911_Sorbi1 |
D |
S |
A |
E |
D |
A |
A |
R |
A |
Y |
D |
A |
A |
A |
R |
M |
L |
R |
G |
P |
K |
A |
R |
T |
N |
F |
P |
L |
P |
A |
A |
A |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
H |
H |
H |
L |
H |
|
AT1G50640.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
F |
T |
D |
H |
Q |
Q |
- |
- |
- |
- |
Q |
F |
P |
I |
V |
N |
R |
P |
T |
S |
S |
S |
M |
S |
S |
T |
V |
E |
S |
F |
S |
G |
P |
R |
P |
T |
T |
M |
K |
P |
A |
T |
T |
K |
R |
Y |
P |
R |
T |
Sb026911_Sorbi1 |
M |
P |
A |
A |
A |
A |
A |
A |
A |
A |
P |
Y |
T |
T |
Y |
P |
N |
A |
T |
G |
V |
S |
T |
P |
P |
V |
A |
R |
P |
A |
C |
S |
S |
L |
S |
S |
T |
V |
E |
S |
F |
G |
G |
A |
R |
P |
R |
P |
V |
L |
P |
- |
- |
- |
- |
- |
- |
P |
R |
P |
|
AT1G50640.1 |
- |
P |
P |
V |
V |
P |
E |
- |
D |
C |
H |
S |
D |
C |
D |
S |
S |
S |
S |
V |
I |
D |
D |
D |
D |
D |
I |
A |
S |
S |
S |
R |
R |
R |
N |
P |
P |
F |
Q |
F |
D |
L |
N |
F |
P |
P |
- |
- |
L |
D |
C |
- |
- |
- |
V |
D |
L |
F |
- |
N |
Sb026911_Sorbi1 |
L |
P |
P |
P |
I |
P |
D |
G |
D |
C |
R |
S |
D |
C |
G |
S |
S |
A |
S |
V |
V |
D |
D |
D |
C |
T |
D |
A |
A |
A |
S |
P |
S |
C |
P |
V |
P |
L |
P |
F |
D |
L |
N |
L |
P |
P |
G |
G |
G |
G |
C |
G |
A |
G |
V |
G |
L |
Y |
A |
D |
|
AT1G50640.1 |
G |
A |
D |
D |
L |
H |
C |
T |
D |
L |
R |
L |
Sb026911_Sorbi1 |
E |
E |
D |
E |
L |
R |
L |
T |
A |
L |
R |
L |
|
|