Input
| Putative repression domain
|
|
AT1G50640.1 |
NPPFQFDLNFPPLDCVD at 198/225 in AT1G50640.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm049039 |
REPLPFDLNVLPLDDAD in 188/212 |
AT3G20310.1 |
not_not |
0.418879056 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G50640.1 MRRGRGSSAVAGPTVVAAINGS----VKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGT
gm049039_Glyma1 --MGRGGTAAAA--VEIAEPGSRPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGT
***.:*.*. * * ** .** *:****************** *********
AT1G50640.1 FDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPP---PPNLRFNQIRNQNQNQVDPFMD
gm049039_Glyma1 FDTAEEAARAYDTAARTLRGPKAKTNFPL---SPPFYHP----------------DPFSD
**:*********:***.***********: *** * *** *
AT1G50640.1 HRL---------FTDHQQQFPIVNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRT
gm049039_Glyma1 HRYFDGAGAGEDFQDHR-------RPTSSGMSSTVESFSGPRAAVPAKAPVIVNRRYPRT
** * **: *****.************ *:. ..:*****
AT1G50640.1 PPVVPEDCHSDCDSSSSVID--DDDDIASSSRRRNPPFQFDLNFPPLDCVDLFNGADDLH
gm049039_Glyma1 PPVVPEDCRSDCDSSSSVVDDGDGDNVASSFRRE--PLPFDLNVLPLDDADV--ATDDLF
********:*********:* *.*::*** **. *: ****. *** .*: .:***.
AT1G50640.1 CTDLRL
gm049039_Glyma1 CTVLCL
** * *
BoxShade v3.31 C (beta, 970507) Output
AT1G50640.1 |
M |
R |
R |
G |
R |
G |
S |
S |
A |
V |
A |
G |
P |
T |
V |
V |
A |
A |
I |
N |
G |
S |
- |
- |
- |
- |
V |
K |
E |
I |
R |
F |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
W |
K |
K |
A |
R |
V |
W |
L |
G |
T |
gm049039_Glyma1 |
- |
- |
M |
G |
R |
G |
G |
T |
A |
A |
A |
A |
- |
- |
V |
E |
I |
A |
E |
P |
G |
S |
R |
P |
V |
F |
F |
K |
E |
P |
R |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
F |
A |
A |
E |
I |
R |
D |
P |
L |
K |
K |
A |
R |
V |
W |
L |
G |
T |
|
AT1G50640.1 |
F |
D |
S |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
S |
A |
A |
R |
N |
L |
R |
G |
P |
K |
A |
K |
T |
N |
F |
P |
I |
D |
S |
S |
S |
P |
P |
- |
- |
- |
P |
P |
N |
L |
R |
F |
N |
Q |
I |
R |
N |
Q |
N |
Q |
N |
Q |
V |
D |
P |
F |
M |
D |
gm049039_Glyma1 |
F |
D |
T |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
T |
A |
A |
R |
T |
L |
R |
G |
P |
K |
A |
K |
T |
N |
F |
P |
L |
- |
- |
- |
S |
P |
P |
F |
Y |
H |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
P |
F |
S |
D |
|
AT1G50640.1 |
H |
R |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
F |
T |
D |
H |
Q |
Q |
Q |
F |
P |
I |
V |
N |
R |
P |
T |
S |
S |
S |
M |
S |
S |
T |
V |
E |
S |
F |
S |
G |
P |
R |
- |
- |
- |
P |
T |
T |
M |
K |
P |
A |
T |
T |
K |
R |
Y |
P |
R |
T |
gm049039_Glyma1 |
H |
R |
Y |
F |
D |
G |
A |
G |
A |
G |
E |
D |
F |
Q |
D |
H |
R |
- |
- |
- |
- |
- |
- |
- |
R |
P |
T |
S |
S |
G |
M |
S |
S |
T |
V |
E |
S |
F |
S |
G |
P |
R |
A |
A |
V |
P |
A |
K |
A |
P |
V |
I |
V |
N |
R |
R |
Y |
P |
R |
T |
|
AT1G50640.1 |
P |
P |
V |
V |
P |
E |
D |
C |
H |
S |
D |
C |
D |
S |
S |
S |
S |
V |
I |
D |
- |
- |
D |
D |
D |
D |
I |
A |
S |
S |
S |
R |
R |
R |
N |
P |
P |
F |
Q |
F |
D |
L |
N |
F |
P |
P |
L |
D |
C |
V |
D |
L |
F |
N |
G |
A |
D |
D |
L |
H |
gm049039_Glyma1 |
P |
P |
V |
V |
P |
E |
D |
C |
R |
S |
D |
C |
D |
S |
S |
S |
S |
V |
V |
D |
D |
G |
D |
G |
D |
N |
V |
A |
S |
S |
F |
R |
R |
E |
- |
- |
P |
L |
P |
F |
D |
L |
N |
V |
L |
P |
L |
D |
D |
A |
D |
V |
- |
- |
A |
T |
D |
D |
L |
F |
|
AT1G50640.1 |
C |
T |
D |
L |
R |
L |
gm049039_Glyma1 |
C |
T |
V |
L |
C |
L |
|
|