fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50640.1 NPPFQFDLNFPPLDCVD at 198/225 in AT1G50640.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023109 REPLPFDLNALPLDDAD in 186/210 AT1G50640.1 1st_1st 0.436578171 Ia
Gm038668 RPPLPFDLNALPFDDDA in 197/222 AT1G50640.1 not_1st 0.424778761 II
Gm049039 REPLPFDLNVLPLDDAD in 188/212 AT3G20310.1 not_not 0.418879056 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G50640.1     MRRGRGSSAVAGPTVVAAINGS----VKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGT
gm038668_Glyma1 MRKGRGGGASAA--AAAAVNGS---VLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGT
gm023109_Glyma0 --MGRGGTAAAA--AEVAEPGLRPVYFKEQRYRGVRKRPWGRFAAEIRDPLKKARVWLGT
gm049039_Glyma1 --MGRGGTAAAA--VEIAEPGSRPVFFKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGT
                   ***. * *.  .  *  *     .** *:****************** *********

AT1G50640.1     FDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPP---PPNLRFNQIRNQNQNQVDP---
gm038668_Glyma1 FDSAEDAARAYDTAARNLRGSKAKTNFPL---SPFCYQHPT-------------TDPFFY
gm023109_Glyma0 FDTAEEAARAYDTAARTLRGPKAKTNFPL---SPPFY-HP---------------DP---
gm049039_Glyma1 FDTAEEAARAYDTAARTLRGPKAKTNFPL---SPPFY-HP---------------DP---
                **:**:******:***.***.*******:   **     *               **   

AT1G50640.1     --FMDHRLF--TDHQQQFPIVNRPTSSSMSSTVESFSGPRP-----TTMKP--ATTKRYP
gm038668_Glyma1 AGFHDHQNNS-NNNNDNLNNPQRPTSSGMSSTVESFSGPRPPTTTTTTTTPFLTTTRRYP
gm023109_Glyma0 --FSDHRHF--ANTGEDFHDHRRPTSSGMSSTVESFSGPR---AAVPATAP-VATGRRYP
gm049039_Glyma1 --FSDHRYFDGAGAGEDFQDHRRPTSSGMSSTVESFSGPR---AAVPAKAP-VIVNRRYP
                  * **:     .  :::   .*****.************      .:  *   . :***

AT1G50640.1     RTPPVVPEDCHSDCDSSSSVIDDD--DDIASSSRRRNPPFQFDLNFPPL-DCVDLFNGAD
gm038668_Glyma1 RTPPLVPEDCHSDCDSSSSVVDDSD-DNIVSSSFR--PPLPFDLNALPFDDDAAVVD--D
gm023109_Glyma0 RTPPVIPEDCRSDCDSSSSVVDDGEGDNVASSFPR--EPLPFDLNALPL-DDADVAT--D
gm049039_Glyma1 RTPPVVPEDCRSDCDSSSSVVDDGDGDNVASSFRR--EPLPFDLNVLPL-DDADVAT--D
                ****::****:*********:**.  *::.**  *   *: ****  *: * . :    *

AT1G50640.1     DLHCTDLRL
gm038668_Glyma1 DLRCTALCL
gm023109_Glyma0 DLFCTVLCL
gm049039_Glyma1 DLFCTVLCL
                ** ** * *
BoxShade v3.31 C (beta, 970507) Output
AT1G50640.1     M R R G R G S S A V A G P T V V A A I N G S - - - - V K E I R F R G V R K R P W G R F A A E I R D P W K K A R V W L G T
gm038668_Glyma1    M R K G R G G G A S A A - - A A A A V N G S - - - V L K E P R Y R G V R K R P W G R F A A E I R D P L K K A R V W L G T
gm023109_Glyma0    - - M G R G G T A A A A - - A E V A E P G L R P V Y F K E Q R Y R G V R K R P W G R F A A E I R D P L K K A R V W L G T
gm049039_Glyma1    - - M G R G G T A A A A - - V E I A E P G S R P V F F K E P R Y R G V R K R P W G R F A A E I R D P L K K A R V W L G T
 
AT1G50640.1     F D S A E E A A R A Y D S A A R N L R G P K A K T N F P I D S S S P P - - - P P N L R F N Q I R N Q N Q N Q V D P - - -
gm038668_Glyma1    F D S A E D A A R A Y D T A A R N L R G S K A K T N F P L - - - S P F C Y Q H P T - - - - - - - - - - - - - T D P F F Y
gm023109_Glyma0    F D T A E E A A R A Y D T A A R T L R G P K A K T N F P L - - - S P P F Y - H P - - - - - - - - - - - - - - - D P - - -
gm049039_Glyma1    F D T A E E A A R A Y D T A A R T L R G P K A K T N F P L - - - S P P F Y - H P - - - - - - - - - - - - - - - D P - - -
 
AT1G50640.1     - - F M D H R L F - - T D H Q Q Q F P I V N R P T S S S M S S T V E S F S G P R P - - - - - T T M K P - - A T T K R Y P
gm038668_Glyma1    A G F H D H Q N N S - N N N N D N L N N P Q R P T S S G M S S T V E S F S G P R P P T T T T T T T T P F L T T T R R Y P
gm023109_Glyma0    - - F S D H R H F - - A N T G E D F H D H R R P T S S G M S S T V E S F S G P R - - - A A V P A T A P - V A T G R R Y P
gm049039_Glyma1    - - F S D H R Y F D G A G A G E D F Q D H R R P T S S G M S S T V E S F S G P R - - - A A V P A K A P - V I V N R R Y P
 
AT1G50640.1     R T P P V V P E D C H S D C D S S S S V I D D D - - D D I A S S S R R R N P P F Q F D L N F P P L - D C V D L F N G A D
gm038668_Glyma1    R T P P L V P E D C H S D C D S S S S V V D D S D - D N I V S S S F R - - P P L P F D L N A L P F D D D A A V V D - - D
gm023109_Glyma0    R T P P V I P E D C R S D C D S S S S V V D D G E G D N V A S S F P R - - E P L P F D L N A L P L - D D A D V A T - - D
gm049039_Glyma1    R T P P V V P E D C R S D C D S S S S V V D D G D G D N V A S S F R R - - E P L P F D L N V L P L - D D A D V A T - - D
 
AT1G50640.1     D L H C T D L R L
gm038668_Glyma1    D L R C T A L C L
gm023109_Glyma0    D L F C T V L C L
gm049039_Glyma1    D L F C T V L C L
 
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