fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055756 TKQGLRLFGVCIT in 212/219 AT1G50680.1 1st_1st 0.326055312 Ib
Pt011633 KQKGFRLFGVQINEV in 347/369 AT1G51120.1 1st_not 0.480349344 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G50680.1     MRLDDEPENALVVSS--SPKTVVAS----------------GNV-KYKGVVQQQNGHWGA
gm055756_Glyma2 ------------------------------------------------------------
pt011633_POPTR_ --MEDQDASSSMISSAKSPTINVETLAFSTSNKLGRLHSNIGNVAKFKGIVPQKNGHWGA
                                                                            

AT1G50680.1     QIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDANSHRNFPWSTITLNEPDFQNCYTT
gm055756_Glyma2 ---------------------MAYDSASIKLRSGE--CHRNFPWNDQTVQEPQFQSHYSA
pt011633_POPTR_ QIYSNHQRIWLGTFKTEKEAAMAYDSAAIKLRSTD--SHRNFPWNDRNVQEPSFQNQYST
                                      *****:***** :  .******.  .::**.**. *::

AT1G50680.1     ETVLNMIRDGSYQHKFRDFLRIR-SQIVASINIGGPKQARGEVNQESDKCFSCTQLFQKE
gm055756_Glyma2 ETVLNMIRDGTYPSKFATFLKTRQTQKGVAKHIGLKGD--------DEEQFCCTQLFQKE
pt011633_POPTR_ EEILNMIRDGSYQQIFVDFI-MKQSQR---EEIGGSDDPNGRRVHADDEQFSCIQLFQKD
                * :*******:*   *  *:  : :*     .**   :        .:: *.* *****:

AT1G50680.1     LTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFR
gm055756_Glyma2 LTPSDVGKLNRLVIPKKHAVSYFPYVGGSADE------SGSV-DVEAVFYDKLMRLWKFR
pt011633_POPTR_ LTPSDVGKLNRLVIPKKFAVKYFPNIFKDVEDDRVLNAAGVD-DTELIFYDRFMKSWKFR
                *****************.**.*:* :  . .:       *   *.* :***: *: ****

AT1G50680.1     YCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTLEGQRKNFLMIDV-HC
gm055756_Glyma2 YCYWKSSQSYVFTRGWNRFVKDKKLKAKDVIAFFTWG------KSGGEGEAFALIDVIYN
pt011633_POPTR_ YCYWRSSQSFVFTKGWNRFVKEKKLKEKDIIIFYTCACPNKVLEQHGQGQYFSMIDVVYC
                ****:****:***:*** ***:*:** **:* *:*           *: : * :*** : 

AT1G50680.1     FSDNGSV---VAEEVS---MTVHDSSVQVKKTENLVSSMLEDKET-KSEENKGGFMLFGV
gm055756_Glyma2 N---------NAEEDS------------------------------KGDTKQ-GLRLFGV
pt011633_POPTR_ NGQGGKVDGFNQTEDVQRELAVVLRQNMRKKLQKDGKELKEEKETLKNKVKQKGFRLFGV
                             *                                *.. :: *: ****

AT1G50680.1     RIE--------CP-----
gm055756_Glyma2 CIT---------------
pt011633_POPTR_ QINEVELQLQPCFQTGTE
                 *
BoxShade v3.31 C (beta, 970507) Output
AT1G50680.1     M R L D D E P E N A L V V S S - - S P K T V V A S - - - - - - - - - - - - - - - - G N V - K Y K G V V Q Q Q N G H W G A
gm055756_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt011633_POPTR_    - - M E D Q D A S S S M I S S A K S P T I N V E T L A F S T S N K L G R L H S N I G N V A K F K G I V P Q K N G H W G A
 
AT1G50680.1     Q I Y A D H K R I W L G T F K S A D E A A T A Y D S A S I K L R S F D A N S H R N F P W S T I T L N E P D F Q N C Y T T
gm055756_Glyma2    - - - - - - - - - - - - - - - - - - - - - M A Y D S A S I K L R S G E - - C H R N F P W N D Q T V Q E P Q F Q S H Y S A
pt011633_POPTR_    Q I Y S N H Q R I W L G T F K T E K E A A M A Y D S A A I K L R S T D - - S H R N F P W N D R N V Q E P S F Q N Q Y S T
 
AT1G50680.1     E T V L N M I R D G S Y Q H K F R D F L R I R - S Q I V A S I N I G G P K Q A R G E V N Q E S D K C F S C T Q L F Q K E
gm055756_Glyma2    E T V L N M I R D G T Y P S K F A T F L K T R Q T Q K G V A K H I G L K G D - - - - - - - - D E E Q F C C T Q L F Q K E
pt011633_POPTR_    E E I L N M I R D G S Y Q Q I F V D F I - M K Q S Q R - - - E E I G G S D D P N G R R V H A D D E Q F S C I Q L F Q K D
 
AT1G50680.1     L T P S D V G K L N R L V I P K K Y A V K Y M P F I S A D Q S E K E E G E I V G S V E D V E V V F Y D R A M R Q W K F R
gm055756_Glyma2    L T P S D V G K L N R L V I P K K H A V S Y F P Y V G G S A D E - - - - - - S G S V - D V E A V F Y D K L M R L W K F R
pt011633_POPTR_    L T P S D V G K L N R L V I P K K F A V K Y F P N I F K D V E D D R V L N A A G V D - D T E L I F Y D R F M K S W K F R
 
AT1G50680.1     Y C Y W K S S Q S F V F T R G W N S F V K E K N L K E K D V I A F Y T C D V P N N V K T L E G Q R K N F L M I D V - H C
gm055756_Glyma2    Y C Y W K S S Q S Y V F T R G W N R F V K D K K L K A K D V I A F F T W G - - - - - - K S G G E G E A F A L I D V I Y N
pt011633_POPTR_    Y C Y W R S S Q S F V F T K G W N R F V K E K K L K E K D I I I F Y T C A C P N K V L E Q H G Q G Q Y F S M I D V V Y C
 
AT1G50680.1     F S D N G S V - - - V A E E V S - - - M T V H D S S V Q V K K T E N L V S S M L E D K E T - K S E E N K G G F M L F G V
gm055756_Glyma2    N - - - - - - - - - N A E E D S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K G D T K Q - G L R L F G V
pt011633_POPTR_    N G Q G G K V D G F N Q T E D V Q R E L A V V L R Q N M R K K L Q K D G K E L K E E K E T L K N K V K Q K G F R L F G V
 
AT1G50680.1     R I E - - - - - - - - C P - - - - -
gm055756_Glyma2    C I T - - - - - - - - - - - - - - -
pt011633_POPTR_    Q I N E V E L Q L Q P C F Q T G T E
 
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