fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011633 KQKGFRLFGVQINEV in 347/369 AT1G51120.1 1st_not 0.480349344 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50680.1     MRLDDEPENALVVSS--SPKTVVAS----------------GNV-KYKGVVQQQNGHWGA
pt011633_POPTR_ --MEDQDASSSMISSAKSPTINVETLAFSTSNKLGRLHSNIGNVAKFKGIVPQKNGHWGA
                  ::*:  .: ::**  **.  * :                *** *:**:* *:******

AT1G50680.1     QIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDANSHRNFPWSTITLNEPDFQNCYTT
pt011633_POPTR_ QIYSNHQRIWLGTFKTEKEAAMAYDSAAIKLRSTD--SHRNFPWNDRNVQEPSFQNQYST
                ***::*:********: .*** *****:***** *  *******.  .::**.*** *:*

AT1G50680.1     ETVLNMIRDGSYQHKFRDFLRIRSQIVASINIGGPKQARGEVNQESDKCFSCTQLFQKEL
pt011633_POPTR_ EEILNMIRDGSYQQIFVDFIMKQSQ---REEIGGSDDPNGRRVHADDEQFSCIQLFQKDL
                * :**********: * **:  :**     :***..:..*.  : .*: *** *****:*

AT1G50680.1     TPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFRY
pt011633_POPTR_ TPSDVGKLNRLVIPKKFAVKYFPNIFKDVEDDRVLNAAG-VDDTELIFYDRFMKSWKFRY
                ****************:****:* *  * .:..  : .* *:*.*::**** *:.*****

AT1G50680.1     CYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFYTCDVPNNVKTLEGQRKNFLMID-VHCF
pt011633_POPTR_ CYWRSSQSFVFTKGWNRFVKEKKLKEKDIIIFYTCACPNKVLEQHGQGQYFSMIDVVYCN
                ***:********:*** *****:*****:* ****  **:*   .** : * *** *:* 

AT1G50680.1     SDNGSV--------VAEEVSMTVHDSSVQVKKTENLVSSMLEDKET-KSEENKGGFMLFG
pt011633_POPTR_ GQGGKVDGFNQTEDVQRELAVVLRQN--MRKKLQKDGKELKEEKETLKNKVKQKGFRLFG
                .:.*.*        * .*:::.:::.    ** ::  ..: *:*** *.: :: ** ***

AT1G50680.1     VRIE--------CP-----
pt011633_POPTR_ VQINEVELQLQPCFQTGTE
                *:*:        *
BoxShade v3.31 C (beta, 970507) Output
AT1G50680.1     M R L D D E P E N A L V V S S - - S P K T V V A S - - - - - - - - - - - - - - - - G N V - K Y K G V V Q Q Q N G H W G A
pt011633_POPTR_    - - M E D Q D A S S S M I S S A K S P T I N V E T L A F S T S N K L G R L H S N I G N V A K F K G I V P Q K N G H W G A
 
AT1G50680.1     Q I Y A D H K R I W L G T F K S A D E A A T A Y D S A S I K L R S F D A N S H R N F P W S T I T L N E P D F Q N C Y T T
pt011633_POPTR_    Q I Y S N H Q R I W L G T F K T E K E A A M A Y D S A A I K L R S T D - - S H R N F P W N D R N V Q E P S F Q N Q Y S T
 
AT1G50680.1     E T V L N M I R D G S Y Q H K F R D F L R I R S Q I V A S I N I G G P K Q A R G E V N Q E S D K C F S C T Q L F Q K E L
pt011633_POPTR_    E E I L N M I R D G S Y Q Q I F V D F I M K Q S Q - - - R E E I G G S D D P N G R R V H A D D E Q F S C I Q L F Q K D L
 
AT1G50680.1     T P S D V G K L N R L V I P K K Y A V K Y M P F I S A D Q S E K E E G E I V G S V E D V E V V F Y D R A M R Q W K F R Y
pt011633_POPTR_    T P S D V G K L N R L V I P K K F A V K Y F P N I F K D V E D D R V L N A A G - V D D T E L I F Y D R F M K S W K F R Y
 
AT1G50680.1     C Y W K S S Q S F V F T R G W N S F V K E K N L K E K D V I A F Y T C D V P N N V K T L E G Q R K N F L M I D - V H C F
pt011633_POPTR_    C Y W R S S Q S F V F T K G W N R F V K E K K L K E K D I I I F Y T C A C P N K V L E Q H G Q G Q Y F S M I D V V Y C N
 
AT1G50680.1     S D N G S V - - - - - - - - V A E E V S M T V H D S S V Q V K K T E N L V S S M L E D K E T - K S E E N K G G F M L F G
pt011633_POPTR_    G Q G G K V D G F N Q T E D V Q R E L A V V L R Q N - - M R K K L Q K D G K E L K E E K E T L K N K V K Q K G F R L F G
 
AT1G50680.1     V R I E - - - - - - - - C P - - - - -
pt011633_POPTR_    V Q I N E V E L Q L Q P C F Q T G T E
 
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