fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G50680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055756 TKQGLRLFGVCIT in 212/219 AT1G50680.1 1st_1st 0.326055312 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G50680.1     MRLDDEPENALVVSSSPKTVVASGNVKYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADE
gm055756_Glyma2 ------------------------------------------------------------
                                                                            

AT1G50680.1     AATAYDSASIKLRSFDANSHRNFPWSTITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDF
gm055756_Glyma2 --MAYDSASIKLRS--GECHRNFPWNDQTVQEPQFQSHYSAETVLNMIRDGTYPSKFATF
                   ***********  .:.******.  *::**:**. *::**********:*  **  *

AT1G50680.1     LRIR-SQIVASINIGGPKQARGEVNQESDKCFSCTQLFQKELTPSDVGKLNRLVIPKKYA
gm055756_Glyma2 LKTRQTQKGVAKHIG--------LKGDDEEQFCCTQLFQKELTPSDVGKLNRLVIPKKHA
                *: * :*  .: :**        :: :.:: *.*************************:*

AT1G50680.1     VKYMPFI--SADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWN
gm055756_Glyma2 VSYFPYVGGSADES--------GSV-DVEAVFYDKLMRLWKFRYCYWKSSQSYVFTRGWN
                *.*:*::  ***:*        *** ***.****: ** *************:*******

AT1G50680.1     SFVKEKNLKEKDVIAFYTCDVPNNVKTLEGQRKNFLMIDVHCFSDNGSVVAEEVSMTVHD
gm055756_Glyma2 RFVKDKKLKAKDVIAFFTWGKSG------GEGEAFALIDV-IYNNN----AEEDS-----
                 ***:*:** ******:* . ..      *: : * :***  :.:*    *** *     

AT1G50680.1     SSVQVKKTENLVSSMLEDKETKSEENKGGFMLFGVRIECP
gm055756_Glyma2 ----------------------KGDTKQGLRLFGVCIT--
                                      . :.* *: **** *
BoxShade v3.31 C (beta, 970507) Output
AT1G50680.1     M R L D D E P E N A L V V S S S P K T V V A S G N V K Y K G V V Q Q Q N G H W G A Q I Y A D H K R I W L G T F K S A D E
gm055756_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G50680.1     A A T A Y D S A S I K L R S F D A N S H R N F P W S T I T L N E P D F Q N C Y T T E T V L N M I R D G S Y Q H K F R D F
gm055756_Glyma2    - - M A Y D S A S I K L R S - - G E C H R N F P W N D Q T V Q E P Q F Q S H Y S A E T V L N M I R D G T Y P S K F A T F
 
AT1G50680.1     L R I R - S Q I V A S I N I G G P K Q A R G E V N Q E S D K C F S C T Q L F Q K E L T P S D V G K L N R L V I P K K Y A
gm055756_Glyma2    L K T R Q T Q K G V A K H I G - - - - - - - - L K G D D E E Q F C C T Q L F Q K E L T P S D V G K L N R L V I P K K H A
 
AT1G50680.1     V K Y M P F I - - S A D Q S E K E E G E I V G S V E D V E V V F Y D R A M R Q W K F R Y C Y W K S S Q S F V F T R G W N
gm055756_Glyma2    V S Y F P Y V G G S A D E S - - - - - - - - G S V - D V E A V F Y D K L M R L W K F R Y C Y W K S S Q S Y V F T R G W N
 
AT1G50680.1     S F V K E K N L K E K D V I A F Y T C D V P N N V K T L E G Q R K N F L M I D V H C F S D N G S V V A E E V S M T V H D
gm055756_Glyma2    R F V K D K K L K A K D V I A F F T W G K S G - - - - - - G E G E A F A L I D V - I Y N N N - - - - A E E D S - - - - -
 
AT1G50680.1     S S V Q V K K T E N L V S S M L E D K E T K S E E N K G G F M L F G V R I E C P
gm055756_Glyma2    - - - - - - - - - - - - - - - - - - - - - - K G D T K Q G L R L F G V C I T - -
 
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