fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028228 not found in 238aa AT5G54680.1 1st_not 0.465065502 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G51070.1     -MVSPENTN-WLSDYPLIEGAFSD-----QNPTFPW--------QIDGSATVSVEVDGFL
pp028228_Pp1s13 MMSSPSNTTKWMS-Y-LAEGLLAEDEVQPSNPFF-WCPSQHPVEQVD----CSIDNECSK
                 * **.**. *:* * * ** :::     .** * *        *:*     *:: :   

AT1G51070.1     CDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVA
pp028228_Pp1s13 GDSDVLEKSCSRKRSREDACSGAGNKACREKMRRDRLNDRFLELSAALEPGRPPKTDKAT
                 *:**:::..**** : ::*:*:..****** *******:* ***:.*****.*****.:

AT1G51070.1     IINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKA
pp028228_Pp1s13 ILSDAVRILTQLRAEAQGLTESNNQLRETIKDLKNEKNELREEKTRLKADKERLEQQVKS
                *:.**:*::.* * *** *.: *..*:*.**:**:******:** :**.:***::**:*:

AT1G51070.1     IKTQPQPQPC-FLPNPQTL--------SQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTS
pp028228_Pp1s13 ISI-----PTGYMPHPAAMHAAAAAFAAQTQAASTKAAQMAAYPGMAMWQWMPPAAVDTS
                *.      *  ::*:* ::        :*:**..:* . :::***:****:*********

AT1G51070.1     QDHVLRPPVA
pp028228_Pp1s13 QDHVLRPPVA
                **********
BoxShade v3.31 C (beta, 970507) Output
AT1G51070.1     - M V S P E N T N - W L S D Y P L I E G A F S D - - - - - Q N P T F P W - - - - - - - - Q I D G S A T V S V E V D G F L
pp028228_Pp1s13    M M S S P S N T T K W M S - Y - L A E G L L A E D E V Q P S N P F F - W C P S Q H P V E Q V D - - - - C S I D N E C S K
 
AT1G51070.1     C D A D V I K E P S S R K R I K T E S C T G S N S K A C R E K Q R R D R L N D K F T E L S S V L E P G R T P K T D K V A
pp028228_Pp1s13    G D S D V L E K S C S R K R S R E D A C S G A G N K A C R E K M R R D R L N D R F L E L S A A L E P G R P P K T D K A T
 
AT1G51070.1     I I N D A I R M V N Q A R D E A Q K L K D L N S S L Q E K I K E L K D E K N E L R D E K Q K L K V E K E R I D Q Q L K A
pp028228_Pp1s13    I L S D A V R I L T Q L R A E A Q G L T E S N N Q L R E T I K D L K N E K N E L R E E K T R L K A D K E R L E Q Q V K S
 
AT1G51070.1     I K T Q P Q P Q P C - F L P N P Q T L - - - - - - - - S Q A Q A P G S K L V P F T T Y P G F A M W Q F M P P A A V D T S
pp028228_Pp1s13    I S I - - - - - P T G Y M P H P A A M H A A A A A F A A Q T Q A A S T K A A Q M A A Y P G M A M W Q W M P P A A V D T S
 
AT1G51070.1     Q D H V L R P P V A
pp028228_Pp1s13    Q D H V L R P P V A
 
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