fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032428 not found in 264aa AT5G54680.1 not_not 0.563318777 III
Pt024472 not found in 243aa AT5G54680.1 not_not 0.515283842 III
Pt018573 not found in 243aa AT5G54680.1 not_not 0.482532751 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G51070.1     MVSP-ENTNWLSDY-----------PLIE----------GAFSDQNPTFPW---------
pt032428_POPTR_ MVSP-GNAALLLDYDQYINMDAINIPAQD----------PNFS----AFSWPPLVQPHHH
pt018573_POPTR_ MVSPNDNANWVFDCGL---IEDVPVPVGEQLCLESLDETPNGS------LW----SSH--
pt024472_POPTR_ MVSPNENDNWVFDCGL---IEDISVPGGDLLGLESLDETPNGS------LW----SSH--
                ****  *   : *            *  :             *       *         

AT1G51070.1     ----------------QIDGSATVS-----VEVDGFLCDADVIKEPSSRKRIKTESCTGS
pt032428_POPTR_ HQHQQQQQQQQQQTLNAFAHTATVSCPNFGAEIDGSFGECDVQKEPCSKKRGRSESCSAS
pt018573_POPTR_ ----------------SFNDTAFLS-----AEFNNSFENSDGLKEIGFRKRVRHGSGNAP
pt024472_POPTR_ ----------------NFTDSAFLS-----VEFNNSYENLDGHKESGSRKRVRPGSSNAT
                                 :  :* :*     .*.:.   : *  **   :** :  * ...

AT1G51070.1     NSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLN
pt032428_POPTR_ SSKACREKLRRDRLNDKFIELGSILEPGRTPKTDKAAILVDAVRMVTQLRDEAQKLRDSN
pt018573_POPTR_ GSKACREKMRRDRLNDRFMELGALLDPGRPPKVDKSAMLVDAARMVTQLRDESQKLKESI
pt024472_POPTR_ GSKACREKMRRDRLNDRFTELGALLDPGRPPKVDKSAILVDAARMVTQLRDESQKLKESN
                .******* *******:* **.::*:***.**.** *:: ** ***.* ***:***::  

AT1G51070.1     SSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTL-----
pt032428_POPTR_ SSLQEKIKELKAEKIELRDEKQRLKAEKEKLEHQLKAMSSQPS----FMPAPPAIPAAFA
pt018573_POPTR_ ESLQEKIDELKAEKNELRDEKQKLKMEKENLEWQQKALSPPPT----YLPHPPAIPAPFS
pt024472_POPTR_ VSLQEKIDELKAEKNELRDEKQRLKTEKENLERQVKALSTPPN----FLPHPSAIPAPFS
                 ******.*** ** *******:** ***.:: * **:.. *     ::* * ::     

AT1G51070.1     SQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQDHVLRPPVA
pt032428_POPTR_ TQGQAPGNKLMPFIGYPGVAMWQFLPPAAVDTSQDHVLHPPVA
pt018573_POPTR_ APGQVVGSKLMPFVGYPGISMWQFMPPTVVDTSQDHVLRPPVA
pt024472_POPTR_ APGQVVGSKLMPFVGYPGISMWQFMPPAVVDTSQDHVLRPPVA
                : .*. *.**:**  ***.:****:**:.*********:****
BoxShade v3.31 C (beta, 970507) Output
AT1G51070.1     M V S P - E N T N W L S D Y - - - - - - - - - - - P L I E - - - - - - - - - - G A F S D Q N P T F P W - - - - - - - - -
pt032428_POPTR_    M V S P - G N A A L L L D Y D Q Y I N M D A I N I P A Q D - - - - - - - - - - P N F S - - - - A F S W P P L V Q P H H H
pt018573_POPTR_    M V S P N D N A N W V F D C G L - - - I E D V P V P V G E Q L C L E S L D E T P N G S - - - - - - L W - - - - S S H - -
pt024472_POPTR_    M V S P N E N D N W V F D C G L - - - I E D I S V P G G D L L G L E S L D E T P N G S - - - - - - L W - - - - S S H - -
 
AT1G51070.1     - - - - - - - - - - - - - - - - Q I D G S A T V S - - - - - V E V D G F L C D A D V I K E P S S R K R I K T E S C T G S
pt032428_POPTR_    H Q H Q Q Q Q Q Q Q Q Q Q T L N A F A H T A T V S C P N F G A E I D G S F G E C D V Q K E P C S K K R G R S E S C S A S
pt018573_POPTR_    - - - - - - - - - - - - - - - - S F N D T A F L S - - - - - A E F N N S F E N S D G L K E I G F R K R V R H G S G N A P
pt024472_POPTR_    - - - - - - - - - - - - - - - - N F T D S A F L S - - - - - V E F N N S Y E N L D G H K E S G S R K R V R P G S S N A T
 
AT1G51070.1     N S K A C R E K Q R R D R L N D K F T E L S S V L E P G R T P K T D K V A I I N D A I R M V N Q A R D E A Q K L K D L N
pt032428_POPTR_    S S K A C R E K L R R D R L N D K F I E L G S I L E P G R T P K T D K A A I L V D A V R M V T Q L R D E A Q K L R D S N
pt018573_POPTR_    G S K A C R E K M R R D R L N D R F M E L G A L L D P G R P P K V D K S A M L V D A A R M V T Q L R D E S Q K L K E S I
pt024472_POPTR_    G S K A C R E K M R R D R L N D R F T E L G A L L D P G R P P K V D K S A I L V D A A R M V T Q L R D E S Q K L K E S N
 
AT1G51070.1     S S L Q E K I K E L K D E K N E L R D E K Q K L K V E K E R I D Q Q L K A I K T Q P Q P Q P C F L P N P Q T L - - - - -
pt032428_POPTR_    S S L Q E K I K E L K A E K I E L R D E K Q R L K A E K E K L E H Q L K A M S S Q P S - - - - F M P A P P A I P A A F A
pt018573_POPTR_    E S L Q E K I D E L K A E K N E L R D E K Q K L K M E K E N L E W Q Q K A L S P P P T - - - - Y L P H P P A I P A P F S
pt024472_POPTR_    V S L Q E K I D E L K A E K N E L R D E K Q R L K T E K E N L E R Q V K A L S T P P N - - - - F L P H P S A I P A P F S
 
AT1G51070.1     S Q A Q A P G S K L V P F T T Y P G F A M W Q F M P P A A V D T S Q D H V L R P P V A
pt032428_POPTR_    T Q G Q A P G N K L M P F I G Y P G V A M W Q F L P P A A V D T S Q D H V L H P P V A
pt018573_POPTR_    A P G Q V V G S K L M P F V G Y P G I S M W Q F M P P T V V D T S Q D H V L R P P V A
pt024472_POPTR_    A P G Q V V G S K L M P F V G Y P G I S M W Q F M P P A V V D T S Q D H V L R P P V A
 
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