fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51070.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037534 not found in 234aa AT5G54680.1 1st_not 0.617903930 II
Gm041354 not found in 212aa AT1G51070.1 not_1st 0.480349344 II
Gm037723 not found in 231aa AT1G51070.1 not_1st 0.460698689 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G51070.1     ---MVSPENTNWLSDYPLI---------EGAFSDQNPTFPWQ-----IDGSATVSVEVDG
gm037723_Glyma1 MDVNSSGGASDWLYDYGFD----IPVAGSDFMASDSGGFRWGPQSHNFKGPSNMSLEMEY
gm037534_Glyma1 ---MVSPENSNWLFDYPLIDDDVIPV-GDSSFAVSASTFSWP------PPPANVSVEIDA
gm041354_Glyma1 ------MSNSNWVLDYDYLDN--IPL-----TTLEPPNFSWSS----SSPPPTLSVELDD
                         ::*: **                : .   * *         ...:*:*:: 

AT1G51070.1     FLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDK
gm037723_Glyma1 SLDST--VMENGPSKRLRTESC-ASGSKACREKLRRDKLNERFLELSSILEPSRQPKSDK
gm037534_Glyma1 SLGDSDGLKNPALKKRTKSDSSTASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDK
gm041354_Glyma1 SFGILDGLKENRSRKRLRP-----SDSKACREKMRRDRLNDRFMELGSILDPRKPLKMDK
                 :     : :    ** :.     *.******* ***:**::* **.*:*:* :  * **

AT1G51070.1     VAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNELRDEKQKLKVEKERIDQQL
gm037723_Glyma1 VAILSDAARVVIQLRNEAKRLKEMNDELQAKVKELKGEKNELRDEKNRLKEEKEKLEQQV
gm037534_Glyma1 ASILIDAARMVTQLRDEALKLKDSNTSLQEKIKELKAEKNELRDEKQRLKAEKEKLEVQV
gm041354_Glyma1 AVILSDAVRVVSQLREEAQKLRESTENLQEKINALKDEKNELRDEKQRLKVEKENLEQKV
                . *: ** *:* * *:** :*:: . .** *:: ** *********::** ***.:: ::

AT1G51070.1     KAIKTQPQPQPCFLPNPQTL-----SQAQAPGSKLVPFTTYPGFAMWQFMPPAAVDTSQD
gm037723_Glyma1 KVANI----QPSFLPQAP------DAKGQVGSHKLIPFIGYPGIAMWQFMSPAAVDTSKD
gm037534_Glyma1 KSMNA----QPAFLPPPPAIPAAFAPQGQAPGNKLVPFISYPGVAMWQFMPPAAVDTSQD
gm041354_Glyma1 KALSS----QPSFL----------AAAGQVVGSKLVPFMGYPGVAMWQFLSPAAVDTSQD
                *  .     **.**           . .*. . **:**  ***.*****:.*******:*

AT1G51070.1     HVLRPPVA
gm037723_Glyma1 HLLRPPVA
gm037534_Glyma1 HVLRPPVA
gm041354_Glyma1 HVLRPPVA
                *:******
BoxShade v3.31 C (beta, 970507) Output
AT1G51070.1     - - - M V S P E N T N W L S D Y P L I - - - - - - - - - E G A F S D Q N P T F P W Q - - - - - I D G S A T V S V E V D G
gm037723_Glyma1    M D V N S S G G A S D W L Y D Y G F D - - - - I P V A G S D F M A S D S G G F R W G P Q S H N F K G P S N M S L E M E Y
gm037534_Glyma1    - - - M V S P E N S N W L F D Y P L I D D D V I P V - G D S S F A V S A S T F S W P - - - - - - P P P A N V S V E I D A
gm041354_Glyma1    - - - - - - M S N S N W V L D Y D Y L D N - - I P L - - - - - T T L E P P N F S W S S - - - - S S P P P T L S V E L D D
 
AT1G51070.1     F L C D A D V I K E P S S R K R I K T E S C T G S N S K A C R E K Q R R D R L N D K F T E L S S V L E P G R T P K T D K
gm037723_Glyma1    S L D S T - - V M E N G P S K R L R T E S C - A S G S K A C R E K L R R D K L N E R F L E L S S I L E P S R Q P K S D K
gm037534_Glyma1    S L G D S D G L K N P A L K K R T K S D S S T A S S S K A C R E K L R R D R L N D K F V E L G S I L E P G R P P K T D K
gm041354_Glyma1    S F G I L D G L K E N R S R K R L R P - - - - - S D S K A C R E K M R R D R L N D R F M E L G S I L D P R K P L K M D K
 
AT1G51070.1     V A I I N D A I R M V N Q A R D E A Q K L K D L N S S L Q E K I K E L K D E K N E L R D E K Q K L K V E K E R I D Q Q L
gm037723_Glyma1    V A I L S D A A R V V I Q L R N E A K R L K E M N D E L Q A K V K E L K G E K N E L R D E K N R L K E E K E K L E Q Q V
gm037534_Glyma1    A S I L I D A A R M V T Q L R D E A L K L K D S N T S L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E V Q V
gm041354_Glyma1    A V I L S D A V R V V S Q L R E E A Q K L R E S T E N L Q E K I N A L K D E K N E L R D E K Q R L K V E K E N L E Q K V
 
AT1G51070.1     K A I K T Q P Q P Q P C F L P N P Q T L - - - - - S Q A Q A P G S K L V P F T T Y P G F A M W Q F M P P A A V D T S Q D
gm037723_Glyma1    K V A N I - - - - Q P S F L P Q A P - - - - - - D A K G Q V G S H K L I P F I G Y P G I A M W Q F M S P A A V D T S K D
gm037534_Glyma1    K S M N A - - - - Q P A F L P P P P A I P A A F A P Q G Q A P G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D
gm041354_Glyma1    K A L S S - - - - Q P S F L - - - - - - - - - - A A A G Q V V G S K L V P F M G Y P G V A M W Q F L S P A A V D T S Q D
 
AT1G51070.1     H V L R P P V A
gm037723_Glyma1    H L L R P P V A
gm037534_Glyma1    H V L R P P V A
gm041354_Glyma1    H V L R P P V A
 
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