fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51220.1 PLVTVDLHLGLPNYGV at 103/337 in AT1G51220.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp013471 not found in 444aa AT3G57670.1 not_not 0.524720893 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G51220.1     ----------------------------------------MSNPACSNLFNNGCD-----
pp013471_Pp1s35 MSFKGAKKFVIRFSATATDSGSAVAGVGKYSGSRVLFSSYTNGPELSHLLERNSTLSELD
                                                         ..*  *:*::...      

AT1G51220.1     ----HNSFNYSTSLSYIYNSHGSYYYSNT--TNPNYINHTHTTSTSPNSPPLREALPLLS
pp013471_Pp1s35 IDTVENSKDDSATMSSRYNPQSSVAVAHPILTFCEWLKPSQPGQSLPHYPV---AIPCES
                    .** : *:::*  **.:.*   ::.  *  :::: ::. .: *: *    *:*  *

AT1G51220.1     L---------------------SPIRHQEQQDQHY-------------------------
pp013471_Pp1s35 LYPGSASGSSCESYFPAQPRSSNPIHRRQLQAQFYNQQARDEHEWRQQRHLQKDVSSEPL
                *                     .**:::: * *.*                         

AT1G51220.1     -FMDTHQISSSNFLDDPL--------------------VTVDLHLGLPNYGVGESIRSNI
pp013471_Pp1s35 PFLSLSPPTGNDDLSDPALRTAILLPEASHASEESDENVTVALHIGPPSSDAMSMSRSTE
                 *:.    :..: *.**                     *** **:* *. .. .  **. 

AT1G51220.1     AP---DATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPSQILIGPTQFT
pp013471_Pp1s35 SPSVYDSLSLVERERLQRG---------------QSRLHEG-QYWIPTPAQILVGPTQFS
                :*   *: :  : :  :**               :. **.* :******:***:*****:

AT1G51220.1     CPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPR
pp013471_Pp1s35 CPVCNKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLACYCCSPGCRNNIDHPR
                **:* *********************************.****.*:**:***:*******

AT1G51220.1     AKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHK
pp013471_Pp1s35 SKPLKDFRTLQTHYKRKHGIKPFMCRKCSKAFAVRGDWRTHEKNCGKLWFCTCGSDFKHK
                :****************** *** ** *.*****:**************:*:********

AT1G51220.1     RSLKDHVKAFGNGHVPCGIDSFGGDHEDYYDAASDIEQ-----
pp013471_Pp1s35 RSLKDHIRAFGNGHAAHGIDSCEDDEDPVSEEDGDEEVSGGSH
                ******::******.. ****  .*.:   :  .* *
BoxShade v3.31 C (beta, 970507) Output
AT1G51220.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S N P A C S N L F N N G C D - - - - -
pp013471_Pp1s35    M S F K G A K K F V I R F S A T A T D S G S A V A G V G K Y S G S R V L F S S Y T N G P E L S H L L E R N S T L S E L D
 
AT1G51220.1     - - - - H N S F N Y S T S L S Y I Y N S H G S Y Y Y S N T - - T N P N Y I N H T H T T S T S P N S P P L R E A L P L L S
pp013471_Pp1s35    I D T V E N S K D D S A T M S S R Y N P Q S S V A V A H P I L T F C E W L K P S Q P G Q S L P H Y P V - - - A I P C E S
 
AT1G51220.1     L - - - - - - - - - - - - - - - - - - - - - S P I R H Q E Q Q D Q H Y - - - - - - - - - - - - - - - - - - - - - - - - -
pp013471_Pp1s35    L Y P G S A S G S S C E S Y F P A Q P R S S N P I H R R Q L Q A Q F Y N Q Q A R D E H E W R Q Q R H L Q K D V S S E P L
 
AT1G51220.1     - F M D T H Q I S S S N F L D D P L - - - - - - - - - - - - - - - - - - - - V T V D L H L G L P N Y G V G E S I R S N I
pp013471_Pp1s35    P F L S L S P P T G N D D L S D P A L R T A I L L P E A S H A S E E S D E N V T V A L H I G P P S S D A M S M S R S T E
 
AT1G51220.1     A P - - - D A T T D E Q D Q D H D R G V E V T V E S H L D D D D D H H G D L H R G H H Y W I P T P S Q I L I G P T Q F T
pp013471_Pp1s35    S P S V Y D S L S L V E R E R L Q R G - - - - - - - - - - - - - - - Q S R L H E G - Q Y W I P T P A Q I L V G P T Q F S
 
AT1G51220.1     C P L C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T G M L R L P C F C C A P G C K N N I D H P R
pp013471_Pp1s35    C P V C N K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L R L A C Y C C S P G C R N N I D H P R
 
AT1G51220.1     A K P L K D F R T L Q T H Y K R K H G S K P F A C R M C G K A F A V K G D W R T H E K N C G K L W Y C S C G S D F K H K
pp013471_Pp1s35    S K P L K D F R T L Q T H Y K R K H G I K P F M C R K C S K A F A V R G D W R T H E K N C G K L W F C T C G S D F K H K
 
AT1G51220.1     R S L K D H V K A F G N G H V P C G I D S F G G D H E D Y Y D A A S D I E Q - - - - -
pp013471_Pp1s35    R S L K D H I R A F G N G H A A H G I D S C E D D E D P V S E E D G D E E V S G G S H
 
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