fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51220.1 PLVTVDLHLGLPNYGV at 103/337 in AT1G51220.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011936 ETVTVALHLGLPSPCS in 112/336 AT3G57670.1 1st_not 0.596491228 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G51220.1     MSNPACSNLFNNGCD----HN-SFNYSTSLSYIYNSHGSYYYSNTT---NPNYINHTHTT
pt011936_POPTR_ MADPY-SNYFNGWYNFKLHHNLSASASSSNPSLYASYGCNTYSDNNTIHNSSFIQFCQ--
                *::*  ** **.  :    ** * . *:* . :* *:*.  **:..   *..:*:. :  

AT1G51220.1     STSPNSPPLREALPLLSLSPIRHQEQQDQH---YFMDTHQISSSNFLDDPLVTVDLHLGL
pt011936_POPTR_ SSSPPSPPLREALPLLSLSPTRHEHQQESSCSAMEVDKNKEREESLCDGETVTVALHLGL
                *:** *************** **:.**:.      :*.::  ...: *.  *** *****

AT1G51220.1     PNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPS
pt011936_POPTR_ PSPCSADLVSRLSSSEISSDKEDVTAASGYQTS------------STLNKG-QYWIPTPS
                *.   .: :    :.: ::*::*     * :.:            . *::* :*******

AT1G51220.1     QILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAP
pt011936_POPTR_ QILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAP
                *********:**************************************.******:****

AT1G51220.1     GCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWY
pt011936_POPTR_ GCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWY
                **:************************** *** ** *******:***************

AT1G51220.1     CSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHEDYYDAASDIEQ--------
pt011936_POPTR_ CTCGSDFKHKRSLKDHIKSFGHGHSANGIDFFEEDDE----PASEIEQDNDSTQRN
                *:**************:*:**:** . *** *  *.*    .**:***
BoxShade v3.31 C (beta, 970507) Output
AT1G51220.1     M S N P A C S N L F N N G C D - - - - H N - S F N Y S T S L S Y I Y N S H G S Y Y Y S N T T - - - N P N Y I N H T H T T
pt011936_POPTR_    M A D P Y - S N Y F N G W Y N F K L H H N L S A S A S S S N P S L Y A S Y G C N T Y S D N N T I H N S S F I Q F C Q - -
 
AT1G51220.1     S T S P N S P P L R E A L P L L S L S P I R H Q E Q Q D Q H - - - Y F M D T H Q I S S S N F L D D P L V T V D L H L G L
pt011936_POPTR_    S S S P P S P P L R E A L P L L S L S P T R H E H Q Q E S S C S A M E V D K N K E R E E S L C D G E T V T V A L H L G L
 
AT1G51220.1     P N Y G V G E S I R S N I A P D A T T D E Q D Q D H D R G V E V T V E S H L D D D D D H H G D L H R G H H Y W I P T P S
pt011936_POPTR_    P S P C S A D L V S R L S S S E I S S D K E D V T A A S G Y Q T S - - - - - - - - - - - - S T L N K G - Q Y W I P T P S
 
AT1G51220.1     Q I L I G P T Q F T C P L C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T G M L R L P C F C C A P
pt011936_POPTR_    Q I L I G P T Q F S C P L C F K T F N R Y N N M Q M H M W G H G S Q Y R K G P E S L R G T Q P T A M L R L P C Y C C A P
 
AT1G51220.1     G C K N N I D H P R A K P L K D F R T L Q T H Y K R K H G S K P F A C R M C G K A F A V K G D W R T H E K N C G K L W Y
pt011936_POPTR_    G C R N N I D H P R A K P L K D F R T L Q T H Y K R K H G I K P F M C R K C G K A F A V R G D W R T H E K N C G K L W Y
 
AT1G51220.1     C S C G S D F K H K R S L K D H V K A F G N G H V P C G I D S F G G D H E D Y Y D A A S D I E Q - - - - - - - -
pt011936_POPTR_    C T C G S D F K H K R S L K D H I K S F G H G H S A N G I D F F E E D D E - - - - P A S E I E Q D N D S T Q R N
 
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