fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51220.1 PLVTVDLHLGLPNYGV at 103/337 in AT1G51220.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm027247 not found in 367aa AT3G57670.1 1st_not 0.585326953 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G51220.1     MSNPACSNLFNNGCDHNSFNY-STSLSYIYNSHGSYYYSNTTNPNYINHTHTT-------
gm027247_Glyma1 MADPY-SNFFSP-LGSNFFHYPSPSPSSQHHHPYAHNFLNQNGSNIINNNHNTFFHFHNF
                *::*  **:*.   . * *:* *.* *  ::   :: : * ...* **:.*.*       

AT1G51220.1     ----------STSPNSPPLREALPLLSLSPIRHQEQQ---DQHYFMDTHQISSSNF---L
gm027247_Glyma1 QTTICSSFSSSSSPPSPPLRVALPLLTLSPKNEEEQEEDDDQEQDQD-HEILQDNFCTAM
                          *:** ***** *****:*** ..:**:   **.   * *:* ..**   :

AT1G51220.1     D---------DPLVTVDLHLGLPNYGVGESIRSNIAPDATTDEQDQDHDRGVEVTVESHL
gm027247_Glyma1 DEEQDQEDGPDETVTVALHIGLPSPSAAE-IASVLSSACSTDQEQQQQQQQQDGNNNNNG
                *         *  *** **:***. ...* * * ::. .:**:::*::::  : . :.: 

AT1G51220.1     DDDDDHHG----DLHRGHHYWIPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQ
gm027247_Glyma1 SDDFSSSGFLSNRLNKG-QYWIPTPSQILIGPTQFSCPVCCKTFNRYNNMQMHMWGHGSQ
                .** .  *     *::* :****************:**:* *******************

AT1G51220.1     YRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFA
gm027247_Glyma1 YRKGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFM
                *********************:**:***:************************** *** 

AT1G51220.1     CRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCGIDSFGG
gm027247_Glyma1 CRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGF--
                ** *******:**************** **************:****.**.. ***.*  

AT1G51220.1     DHEDYYDAASDIEQ--
gm027247_Glyma1 --EEEEEPASEVEQDR
                  *:  :.**::**
BoxShade v3.31 C (beta, 970507) Output
AT1G51220.1     M S N P A C S N L F N N G C D H N S F N Y - S T S L S Y I Y N S H G S Y Y Y S N T T N P N Y I N H T H T T - - - - - - -
gm027247_Glyma1    M A D P Y - S N F F S P - L G S N F F H Y P S P S P S S Q H H H P Y A H N F L N Q N G S N I I N N N H N T F F H F H N F
 
AT1G51220.1     - - - - - - - - - - S T S P N S P P L R E A L P L L S L S P I R H Q E Q Q - - - D Q H Y F M D T H Q I S S S N F - - - L
gm027247_Glyma1    Q T T I C S S F S S S S S P P S P P L R V A L P L L T L S P K N E E E Q E E D D D Q E Q D Q D - H E I L Q D N F C T A M
 
AT1G51220.1     D - - - - - - - - - D P L V T V D L H L G L P N Y G V G E S I R S N I A P D A T T D E Q D Q D H D R G V E V T V E S H L
gm027247_Glyma1    D E E Q D Q E D G P D E T V T V A L H I G L P S P S A A E - I A S V L S S A C S T D Q E Q Q Q Q Q Q Q Q D G N N N N N G
 
AT1G51220.1     D D D D D H H G - - - - D L H R G H H Y W I P T P S Q I L I G P T Q F T C P L C F K T F N R Y N N M Q M H M W G H G S Q
gm027247_Glyma1    S D D F S S S G F L S N R L N K G - Q Y W I P T P S Q I L I G P T Q F S C P V C C K T F N R Y N N M Q M H M W G H G S Q
 
AT1G51220.1     Y R K G P E S L R G T Q P T G M L R L P C F C C A P G C K N N I D H P R A K P L K D F R T L Q T H Y K R K H G S K P F A
gm027247_Glyma1    Y R K G P E S L R G T Q P T G M L R L P C Y C C S P G C R N N I D H P R A K P L K D F R T L Q T H Y K R K H G I K P F M
 
AT1G51220.1     C R M C G K A F A V K G D W R T H E K N C G K L W Y C S C G S D F K H K R S L K D H V K A F G N G H V P C G I D S F G G
gm027247_Glyma1    C R K C G K A F A V R G D W R T H E K N C G K L W Y C I C G S D F K H K R S L K D H I K A F G S G H A A Y G I D G F - -
 
AT1G51220.1     D H E D Y Y D A A S D I E Q - -
gm027247_Glyma1    - - E E E E E P A S E V E Q D R
 
0