fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034048 not found in 307aa AT1G51600.2 1st_not 0.519417475 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G51600.1     -MDDLHGSN--ARMHIR-EAQDP-MHVQFEHHALHH-----IHNGSGMV-----DDQADD
pt034048_POPTR_ MMDGINGSNISARMQTSTEAQNPSMQMHYDHHQNHQNGIQMMNNANGMIMNSGDNDQDHN
                 **.::***  ***:   ***:* *:::::**  *:     ::*..**:     :** .:

AT1G51600.1     G--NAGGMSEGVETDIPSHPGNV---TDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLP
pt034048_POPTR_ GVVNGGG-------DDDDHGGTMMVAADNHGK------ENGDQLTLTFQGQVYVFDSVSP
                *  *.**       *  .* *.:   :**:*:      *:******:*********** *

AT1G51600.1     EKVQAVLLLLGGRELPQAAPPGLG-SPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRK
pt034048_POPTR_ GKVQAVLLLLGGREVPAASTPTVPITTHHNSNNRGLSGTPQRFSVPQRLASLIRFREKRK
                 *************:* *:.* :  :.*:*..  .*.*******:*******:*******

AT1G51600.1     GRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQ
pt034048_POPTR_ ERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPNHDDSASAATSWGSNESGGSDSNGSQHQ
                 ****************************:*.*:*::***.:*****:: . :*. :***

AT1G51600.1     EISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTA-QNLPLNK
pt034048_POPTR_ EAICRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPHTGPSSSSMNS
                *  ******.*********** *****************::******:*:*. .. .:*.

AT1G51600.1     NE-DANLETDHQIMITVANDISNSQ
pt034048_POPTR_ NAMDGN--TDGNQRVAWNNDFS---
                *  *.*  ** :  ::  **:*
BoxShade v3.31 C (beta, 970507) Output
AT1G51600.1     - M D D L H G S N - - A R M H I R - E A Q D P - M H V Q F E H H A L H H - - - - - I H N G S G M V - - - - - D D Q A D D
pt034048_POPTR_    M M D G I N G S N I S A R M Q T S T E A Q N P S M Q M H Y D H H Q N H Q N G I Q M M N N A N G M I M N S G D N D Q D H N
 
AT1G51600.1     G - - N A G G M S E G V E T D I P S H P G N V - - - T D N R G E V V D R G S E Q G D Q L T L S F Q G Q V Y V F D S V L P
pt034048_POPTR_    G V V N G G G - - - - - - - D D D D H G G T M M V A A D N H G K - - - - - - E N G D Q L T L T F Q G Q V Y V F D S V S P
 
AT1G51600.1     E K V Q A V L L L L G G R E L P Q A A P P G L G - S P H Q N N R V S S L P G T P Q R F S I P Q R L A S L V R F R E K R K
pt034048_POPTR_    G K V Q A V L L L L G G R E V P A A S T P T V P I T T H H N S N N R G L S G T P Q R F S V P Q R L A S L I R F R E K R K
 
AT1G51600.1     G R N F D K K I R Y T V R K E V A L R M Q R N K G Q F T S A K S N N D E A A S A G S S W G S N Q T W A I E S S E A Q H Q
pt034048_POPTR_    E R N F D K K I R Y T V R K E V A L R M Q R N K G Q F T S S K P N H D D S A S A A T S W G S N E S G G S D S N G S Q H Q
 
AT1G51600.1     E I S C R H C G I G E K S T P M M R R G P A G P R T L C N A C G L M W A N K G A F R D L S K A S P Q T A - Q N L P L N K
pt034048_POPTR_    E A I C R H C G I S E K S T P M M R R G P E G P R T L C N A C G L M W A N K G T L R D L S K A A P H T G P S S S S M N S
 
AT1G51600.1     N E - D A N L E T D H Q I M I T V A N D I S N S Q
pt034048_POPTR_    N A M D G N - - T D G N Q R V A W N N D F S - - -
 
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