fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G51600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm022186 not found in 300aa AT1G51600.2 1st_not 0.608414239 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G51600.1     MDDLHGSNARMHIREAQDPMHVQF----EHHALHHIHNGSGMVDDQADDG--NAGGMSEG
gm022186_Glyma0 MDGIHGGDSRIHITDGQHPIHVPYVQEHEHHGLHHISNGNGIDDDHNDGGDTNCGG-SES
                **.:**.::*:** :.*.*:** :    ***.**** **.*: **: *.*  *.** **.

AT1G51600.1     VETDIPSHPGNVTDNRGEVVDRGSEQGDQLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRE
gm022186_Glyma0 MEGEVPSNHGNLPDNHAVMMDQGGDSGDQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGRE
                :* ::**: **:.**:. ::*:*.:.****************** ***************

AT1G51600.1     LPQAAPPGLGSPHQNNRVSSLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKE
gm022186_Glyma0 IPPTMPAMPVSPNHNNR--GYTGTPQKFSVPQRLASLIRFREKRKERNYDKKIRYTVRKE
                :* : *.   **::***  . .****:**:*******:******* **:***********

AT1G51600.1     VALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTP
gm022186_Glyma0 VALRMQRNKGQFTSSKSNNDESASNATNWGMDENWTADNSGSQQQDIVCRHCGISEKSTP
                **************:******:** .:.** ::.*: :.* :*:*:* ******.*****

AT1G51600.1     MMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQIMITV
gm022186_Glyma0 MMRRGPEGPRTLCNACGLMWANKGILRDLSRAAPLSGT----IKNENKSLEAN-QIVHRV
                ****** ***************** :****:*:* :.      ***: .**:: **:  *

AT1G51600.1     ANDISNSQ
gm022186_Glyma0 AGEADDSS
                *.: .:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G51600.1     M D D L H G S N A R M H I R E A Q D P M H V Q F - - - - E H H A L H H I H N G S G M V D D Q A D D G - - N A G G M S E G
gm022186_Glyma0    M D G I H G G D S R I H I T D G Q H P I H V P Y V Q E H E H H G L H H I S N G N G I D D D H N D G G D T N C G G - S E S
 
AT1G51600.1     V E T D I P S H P G N V T D N R G E V V D R G S E Q G D Q L T L S F Q G Q V Y V F D S V L P E K V Q A V L L L L G G R E
gm022186_Glyma0    M E G E V P S N H G N L P D N H A V M M D Q G G D S G D Q L T L S F Q G Q V Y V F D S V S P E K V Q A V L L L L G G R E
 
AT1G51600.1     L P Q A A P P G L G S P H Q N N R V S S L P G T P Q R F S I P Q R L A S L V R F R E K R K G R N F D K K I R Y T V R K E
gm022186_Glyma0    I P P T M P A M P V S P N H N N R - - G Y T G T P Q K F S V P Q R L A S L I R F R E K R K E R N Y D K K I R Y T V R K E
 
AT1G51600.1     V A L R M Q R N K G Q F T S A K S N N D E A A S A G S S W G S N Q T W A I E S S E A Q H Q E I S C R H C G I G E K S T P
gm022186_Glyma0    V A L R M Q R N K G Q F T S S K S N N D E S A S N A T N W G M D E N W T A D N S G S Q Q Q D I V C R H C G I S E K S T P
 
AT1G51600.1     M M R R G P A G P R T L C N A C G L M W A N K G A F R D L S K A S P Q T A Q N L P L N K N E D A N L E T D H Q I M I T V
gm022186_Glyma0    M M R R G P E G P R T L C N A C G L M W A N K G I L R D L S R A A P L S G T - - - - I K N E N K S L E A N - Q I V H R V
 
AT1G51600.1     A N D I S N S Q
gm022186_Glyma0    A G E A D D S S
 
0