Input
| Putative repression domain
|
|
AT1G52830.1 |
ALEITELRLGLPGDNY at 11/189 in AT1G52830.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm022022 |
GLEITELRLGLPDAEH in 12/195 |
AT3G15540.1 |
1st_not |
0.551319648 |
II |
HKGYSDLALALDKLFG in 112/195 |
Pt028706 |
not found in 189aa |
AT3G15540.1 |
1st_not |
0.536656891 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G52830.1 MAKEGLALEITELRLGLPGDNYSEISVCGSSKKKKRVLSDMMTSSALDTENENSVVSSVE
gm022022_Glyma0 MAKEGLGLEITELRLGLPDAEHQ-VSVVNKKNEKKRAFSEIDDG----VGDENSSSGGG-
pt028706_POPTR_ MAQP-LGLEITELRLGPPGSEN------GPKNEKKRVFSELS-------GEANSTTDG--
**: *.********* *. : . .::***.:*:: : ** ..
AT1G52830.1 DESLPVVKSQAVGWPPVCSYRRKKN-NEE----ASKAIGYVKVSMDGVPYMRKIDLGSSN
gm022022_Glyma0 DRKMETNKSQVVGWPPVCSYRKKNSMNEG----ASKM--YVKVSMDGAPFLRKIDLGLHK
pt028706_POPTR_ -RKTQTT-SQVVGWPPVCSYRKKNSFNEKDSHETSKI--YVKVSMDGAPFLRKVDLGMHK
.. . **.**********:*:. ** :** ********.*::**:*** :
AT1G52830.1 SYINLVTVLENLFGCLGIGVA-KEGKKCEYIIIYEDKDRDWMLVGDVPWQMFKESCKRLR
gm022022_Glyma0 GYSDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLR
pt028706_POPTR_ EYSDLVVALEKLFGCFGIGKALKDTDDCEYVPIYEDKDGDWMLVGDVPWEMFIESCKRLR
* :*. .*::**** *: * *: ...*:: ****** **********:** *******
AT1G52830.1 IVKRSDATGFGLQQD--------------
gm022022_Glyma0 IMKKSDAKGFGLQPKGSL-KGFIESAAK-
pt028706_POPTR_ IMKRSEAKGFGLQPRGALQQGNISKDDRD
*:*:*:*.*****
BoxShade v3.31 C (beta, 970507) Output
AT1G52830.1 |
M |
A |
K |
E |
G |
L |
A |
L |
E |
I |
T |
E |
L |
R |
L |
G |
L |
P |
G |
D |
N |
Y |
S |
E |
I |
S |
V |
C |
G |
S |
S |
K |
K |
K |
K |
R |
V |
L |
S |
D |
M |
M |
T |
S |
S |
A |
L |
D |
T |
E |
N |
E |
N |
S |
V |
V |
S |
S |
V |
E |
gm022022_Glyma0 |
M |
A |
K |
E |
G |
L |
G |
L |
E |
I |
T |
E |
L |
R |
L |
G |
L |
P |
D |
A |
E |
H |
Q |
- |
V |
S |
V |
V |
N |
K |
K |
N |
E |
K |
K |
R |
A |
F |
S |
E |
I |
D |
D |
G |
- |
- |
- |
- |
V |
G |
D |
E |
N |
S |
S |
S |
G |
G |
G |
- |
pt028706_POPTR_ |
M |
A |
Q |
P |
- |
L |
G |
L |
E |
I |
T |
E |
L |
R |
L |
G |
P |
P |
G |
S |
E |
N |
- |
- |
- |
- |
- |
- |
G |
P |
K |
N |
E |
K |
K |
R |
V |
F |
S |
E |
L |
S |
- |
- |
- |
- |
- |
- |
- |
G |
E |
A |
N |
S |
T |
T |
D |
G |
- |
- |
|
AT1G52830.1 |
D |
E |
S |
L |
P |
V |
V |
K |
S |
Q |
A |
V |
G |
W |
P |
P |
V |
C |
S |
Y |
R |
R |
K |
K |
N |
- |
N |
E |
E |
- |
- |
- |
- |
A |
S |
K |
A |
I |
G |
Y |
V |
K |
V |
S |
M |
D |
G |
V |
P |
Y |
M |
R |
K |
I |
D |
L |
G |
S |
S |
N |
gm022022_Glyma0 |
D |
R |
K |
M |
E |
T |
N |
K |
S |
Q |
V |
V |
G |
W |
P |
P |
V |
C |
S |
Y |
R |
K |
K |
N |
S |
M |
N |
E |
G |
- |
- |
- |
- |
A |
S |
K |
M |
- |
- |
Y |
V |
K |
V |
S |
M |
D |
G |
A |
P |
F |
L |
R |
K |
I |
D |
L |
G |
L |
H |
K |
pt028706_POPTR_ |
- |
R |
K |
T |
Q |
T |
T |
- |
S |
Q |
V |
V |
G |
W |
P |
P |
V |
C |
S |
Y |
R |
K |
K |
N |
S |
F |
N |
E |
K |
D |
S |
H |
E |
T |
S |
K |
I |
- |
- |
Y |
V |
K |
V |
S |
M |
D |
G |
A |
P |
F |
L |
R |
K |
V |
D |
L |
G |
M |
H |
K |
|
AT1G52830.1 |
S |
Y |
I |
N |
L |
V |
T |
V |
L |
E |
N |
L |
F |
G |
C |
L |
G |
I |
G |
V |
A |
- |
K |
E |
G |
K |
K |
C |
E |
Y |
I |
I |
I |
Y |
E |
D |
K |
D |
R |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
Q |
M |
F |
K |
E |
S |
C |
K |
R |
L |
R |
gm022022_Glyma0 |
G |
Y |
S |
D |
L |
A |
L |
A |
L |
D |
K |
L |
F |
G |
C |
Y |
G |
M |
V |
E |
A |
L |
K |
N |
A |
D |
N |
S |
E |
H |
V |
P |
I |
Y |
E |
D |
K |
D |
G |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
E |
M |
F |
M |
E |
S |
C |
K |
R |
L |
R |
pt028706_POPTR_ |
E |
Y |
S |
D |
L |
V |
V |
A |
L |
E |
K |
L |
F |
G |
C |
F |
G |
I |
G |
K |
A |
L |
K |
D |
T |
D |
D |
C |
E |
Y |
V |
P |
I |
Y |
E |
D |
K |
D |
G |
D |
W |
M |
L |
V |
G |
D |
V |
P |
W |
E |
M |
F |
I |
E |
S |
C |
K |
R |
L |
R |
|
AT1G52830.1 |
I |
V |
K |
R |
S |
D |
A |
T |
G |
F |
G |
L |
Q |
Q |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm022022_Glyma0 |
I |
M |
K |
K |
S |
D |
A |
K |
G |
F |
G |
L |
Q |
P |
K |
G |
S |
L |
- |
K |
G |
F |
I |
E |
S |
A |
A |
K |
- |
pt028706_POPTR_ |
I |
M |
K |
R |
S |
E |
A |
K |
G |
F |
G |
L |
Q |
P |
R |
G |
A |
L |
Q |
Q |
G |
N |
I |
S |
K |
D |
D |
R |
D |
|
|