Input
| Putative repression domain
|
|
AT1G52830.1 |
ALEITELRLGLPGDNY at 11/189 in AT1G52830.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt028706 |
not found in 189aa |
AT3G15540.1 |
1st_not |
0.536656891 |
II |
Pt010911 |
GLEITELRLGLPGSDD in 11/184 |
AT3G15540.1 |
not_not |
0.510263929 |
III |
Pt001236 |
NLEATELRLGLPGTAT in 13/201 |
AT5G43700.1 |
not_not |
0.401759530 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G52830.1 M-AKEGLALEITELRLGLPGDNYSEISV----CGSSKKKKRVLSDMMTSSALDTENENSV
pt010911_POPTR_ --MAQPLGLEITELRLGLPGS-----------DDGHKNDKKRV--FSEVSG-----EANS
pt001236_POPTR_ MEFERDLNLEATELRLGLPGTATEQLEKQTPNSNVTKSNKRSLPDMNEDSAG--RRESSS
pt028706_POPTR_ --MAQPLGLEITELRLGPPGS-----------ENGPKNEKKRV--FSELSG-----EANS
. * ** ****** ** . *..*: : : *. * .
AT1G52830.1 VSSVEDESL-----PVVKSQAVGWPPVCSYRRK------KNNEEASKAIGYVKVSMDGVP
pt010911_POPTR_ -TTDDRKVQ-------TKSQVVGWPPVCSYRKNISFNERDRHHETSKI--YVKVSMDGAP
pt001236_POPTR_ VSSNDKKSHEQETAPPTKTQVVGWPPIRSYRKN-CLQARKLEAEAAGL--YVKVSMDGAP
pt028706_POPTR_ -TTDGRKTQ-------TTSQVVGWPPVCSYRKKNSFNEKDS-HETSKI--YVKVSMDGAP
:: : ..:*.*****: ***:: . *:: ********.*
AT1G52830.1 YMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEG---KKCEYIIIYEDKDRDWMLVGDV
pt010911_POPTR_ FLRKIDLGMHKEYSDLVVALERLFGCYGIGKALKD------EYVPIYEDKDGDWMLVGDV
pt001236_POPTR_ YLRKIDLKVYKGYPELLEVVEEMFK-FKVGEYSEREGYNGSEYVPTYEDKDGDWMLVGDV
pt028706_POPTR_ FLRKVDLGMHKEYSDLVVALEKLFGCFGIGKALKDT--DDCEYVPIYEDKDGDWMLVGDV
::**:** : * :*: .:*.:* :* : **: ***** ********
AT1G52830.1 PWQMFKESCKRLRIVKRSDATGFGLQQ-----------D---
pt010911_POPTR_ PWEMFFESCKRLRIMKSSEAKGFGLQPRGALK--GISKDERH
pt001236_POPTR_ PWEMFINSCKRLRIMKESEARGLGCAV---------------
pt028706_POPTR_ PWEMFIESCKRLRIMKRSEAKGFGLQPRGALQQGNISKDDRD
**:** :*******:* *:* *:*
BoxShade v3.31 C (beta, 970507) Output
AT1G52830.1 |
M |
- |
A |
K |
E |
G |
L |
A |
L |
E |
I |
T |
E |
L |
R |
L |
G |
L |
P |
G |
D |
N |
Y |
S |
E |
I |
S |
V |
- |
- |
- |
- |
C |
G |
S |
S |
K |
K |
K |
K |
R |
V |
L |
S |
D |
M |
M |
T |
S |
S |
A |
L |
D |
T |
E |
N |
E |
N |
S |
V |
pt010911_POPTR_ |
- |
- |
M |
A |
Q |
P |
L |
G |
L |
E |
I |
T |
E |
L |
R |
L |
G |
L |
P |
G |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
D |
G |
H |
K |
N |
D |
K |
K |
R |
V |
- |
- |
F |
S |
E |
V |
S |
G |
- |
- |
- |
- |
- |
E |
A |
N |
S |
pt001236_POPTR_ |
M |
E |
F |
E |
R |
D |
L |
N |
L |
E |
A |
T |
E |
L |
R |
L |
G |
L |
P |
G |
T |
A |
T |
E |
Q |
L |
E |
K |
Q |
T |
P |
N |
S |
N |
V |
T |
K |
S |
N |
K |
R |
S |
L |
P |
D |
M |
N |
E |
D |
S |
A |
G |
- |
- |
R |
R |
E |
S |
S |
S |
pt028706_POPTR_ |
- |
- |
M |
A |
Q |
P |
L |
G |
L |
E |
I |
T |
E |
L |
R |
L |
G |
P |
P |
G |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
E |
N |
G |
P |
K |
N |
E |
K |
K |
R |
V |
- |
- |
F |
S |
E |
L |
S |
G |
- |
- |
- |
- |
- |
E |
A |
N |
S |
|
AT1G52830.1 |
V |
S |
S |
V |
E |
D |
E |
S |
L |
- |
- |
- |
- |
- |
P |
V |
V |
K |
S |
Q |
A |
V |
G |
W |
P |
P |
V |
C |
S |
Y |
R |
R |
K |
- |
- |
- |
- |
- |
- |
K |
N |
N |
E |
E |
A |
S |
K |
A |
I |
G |
Y |
V |
K |
V |
S |
M |
D |
G |
V |
P |
pt010911_POPTR_ |
- |
T |
T |
D |
D |
R |
K |
V |
Q |
- |
- |
- |
- |
- |
- |
- |
T |
K |
S |
Q |
V |
V |
G |
W |
P |
P |
V |
C |
S |
Y |
R |
K |
N |
I |
S |
F |
N |
E |
R |
D |
R |
H |
H |
E |
T |
S |
K |
I |
- |
- |
Y |
V |
K |
V |
S |
M |
D |
G |
A |
P |
pt001236_POPTR_ |
V |
S |
S |
N |
D |
K |
K |
S |
H |
E |
Q |
E |
T |
A |
P |
P |
T |
K |
T |
Q |
V |
V |
G |
W |
P |
P |
I |
R |
S |
Y |
R |
K |
N |
- |
C |
L |
Q |
A |
R |
K |
L |
E |
A |
E |
A |
A |
G |
L |
- |
- |
Y |
V |
K |
V |
S |
M |
D |
G |
A |
P |
pt028706_POPTR_ |
- |
T |
T |
D |
G |
R |
K |
T |
Q |
- |
- |
- |
- |
- |
- |
- |
T |
T |
S |
Q |
V |
V |
G |
W |
P |
P |
V |
C |
S |
Y |
R |
K |
K |
N |
S |
F |
N |
E |
K |
D |
S |
- |
H |
E |
T |
S |
K |
I |
- |
- |
Y |
V |
K |
V |
S |
M |
D |
G |
A |
P |
|
AT1G52830.1 |
Y |
M |
R |
K |
I |
D |
L |
G |
S |
S |
N |
S |
Y |
I |
N |
L |
V |
T |
V |
L |
E |
N |
L |
F |
G |
C |
L |
G |
I |
G |
V |
A |
K |
E |
G |
- |
- |
- |
K |
K |
C |
E |
Y |
I |
I |
I |
Y |
E |
D |
K |
D |
R |
D |
W |
M |
L |
V |
G |
D |
V |
pt010911_POPTR_ |
F |
L |
R |
K |
I |
D |
L |
G |
M |
H |
K |
E |
Y |
S |
D |
L |
V |
V |
A |
L |
E |
R |
L |
F |
G |
C |
Y |
G |
I |
G |
K |
A |
L |
K |
D |
- |
- |
- |
- |
- |
- |
E |
Y |
V |
P |
I |
Y |
E |
D |
K |
D |
G |
D |
W |
M |
L |
V |
G |
D |
V |
pt001236_POPTR_ |
Y |
L |
R |
K |
I |
D |
L |
K |
V |
Y |
K |
G |
Y |
P |
E |
L |
L |
E |
V |
V |
E |
E |
M |
F |
K |
- |
F |
K |
V |
G |
E |
Y |
S |
E |
R |
E |
G |
Y |
N |
G |
S |
E |
Y |
V |
P |
T |
Y |
E |
D |
K |
D |
G |
D |
W |
M |
L |
V |
G |
D |
V |
pt028706_POPTR_ |
F |
L |
R |
K |
V |
D |
L |
G |
M |
H |
K |
E |
Y |
S |
D |
L |
V |
V |
A |
L |
E |
K |
L |
F |
G |
C |
F |
G |
I |
G |
K |
A |
L |
K |
D |
T |
- |
- |
D |
D |
C |
E |
Y |
V |
P |
I |
Y |
E |
D |
K |
D |
G |
D |
W |
M |
L |
V |
G |
D |
V |
|
AT1G52830.1 |
P |
W |
Q |
M |
F |
K |
E |
S |
C |
K |
R |
L |
R |
I |
V |
K |
R |
S |
D |
A |
T |
G |
F |
G |
L |
Q |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
D |
- |
- |
- |
pt010911_POPTR_ |
P |
W |
E |
M |
F |
F |
E |
S |
C |
K |
R |
L |
R |
I |
M |
K |
S |
S |
E |
A |
K |
G |
F |
G |
L |
Q |
P |
R |
G |
A |
L |
K |
- |
- |
G |
I |
S |
K |
D |
E |
R |
H |
pt001236_POPTR_ |
P |
W |
E |
M |
F |
I |
N |
S |
C |
K |
R |
L |
R |
I |
M |
K |
E |
S |
E |
A |
R |
G |
L |
G |
C |
A |
V |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt028706_POPTR_ |
P |
W |
E |
M |
F |
I |
E |
S |
C |
K |
R |
L |
R |
I |
M |
K |
R |
S |
E |
A |
K |
G |
F |
G |
L |
Q |
P |
R |
G |
A |
L |
Q |
Q |
G |
N |
I |
S |
K |
D |
D |
R |
D |
|
|