fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G52830.1 ALEITELRLGLPGDNY at 11/189 in AT1G52830.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017314 GLEITELRLGLPDAEH in 12/187 AT3G15540.1 not_not 0.527859237 III
HKGYSDLALALDKLFG in 104/187
Gm040797 LEITTELRLGLPGGEL in 13/187 AT3G15540.1 not_not 0.504398826 III
HKGYSELALALEKFFG in 104/187
Gm038311 LEITTELRLGLPGGEL in 13/189 AT3G15540.1 not_not 0.498533724 III
Gm004012 NLEATELRLGLPGSDE in 18/202 AT5G43700.1 not_not 0.419354838 III
Gm055370 NLKATELRLGLPGTEE in 18/194 AT5G43700.1 not_not 0.401759530 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G52830.1     ------MAKEGLALEI-TELRLGLPGDNYS-EISVCGSSKK-KKRVLSDMMTSSA-----
gm038311_Glyma1 ------MEKEAVGLEITTELRLGLPGGE------LPDKNEKIKKRVFSEIQ---------
gm040797_Glyma1 ------MEKEGVGLEITTELRLGLPGGE------LPDKNEKMKKRVFSEI----------
gm017314_Glyma0 ------MAKEGLGLEI-TELRLGLPDAEH---VTVVNKNE--KKRAFSQI----------
gm055370_Glyma2 MENTTVTYQTDLNLKA-TELRLGLPGTEESEEKTLSAGARINNKRPLTETS-DEC-----
gm004012_Glyma0 MENSLGKYGKELNLEA-TELRLGLPGSDEPEKRS----AVRSNKRSSPEASEEECISKGN
                           : *:  ********. :              :**  .:           

AT1G52830.1     LDTENENSVVSSVEDESLPVVKSQAVGWPPVCSYRR------KKNNEEASKAIGYVKVSM
gm038311_Glyma1 AHDDDENS--SSEQDRKIQT-KNQVVGWPPVCSYRK------KNTVNE-TKM--YVKVSM
gm040797_Glyma1 -NQGDENS--SSEEDRKIQT-KNQVVGWPPVCSYRK------KNTINE-TKM--YVKVSM
gm017314_Glyma0 ---DDENS--SSGGDRKIKTNKSQVVGWPPVCSYRK------KNSMNEGSKM--YVKVSM
gm055370_Glyma2 --ASNGTSSAPHEKTETAPPAKTKIVGWPPIRSYRKNSLQ-----ESEGAGI--YVKVSM
gm004012_Glyma0 MNSSDGSDITSDDQDNVVPPAKAQVVGWPPVRSYRKNSLQQKKEEQAEGAGM--YVKVSM
                    : ..  .    .     * : *****: ***:           * :    ******

AT1G52830.1     DGVPYMRKIDLGSSNSYINLVTVLENLFGC-LGIGVA-KEGKKCEYIIIYEDKDRDWMLV
gm038311_Glyma1 DGAPFLRKIDLAMHKGYSELVLALEKFFGC-YGIREALKDAENAEHVPIYEDKDGDWMLV
gm040797_Glyma1 DGAPFLRKIDLAMHKGYSELALALEKFFGC-YGIGSALKDEENVEQVPIYEDKDGDWMLV
gm017314_Glyma0 DGAPFLRKIDLGLHKGYSDLALALDKLFGS-YGMVEALKNADNSEHVPIYEDKDGDWMLV
gm055370_Glyma2 DGAPYLRKIDLKVYGGYTQLLKSLENMFKLTIGEHSEKEGYKGSDYAPTYEDKDGDWMLV
gm004012_Glyma0 EGAPYLRKIDLKVYKSYPELLKALENMFKCTFGQYSEREGYNGSEYAPTYEDKDGDWMLV
                :*.*::*****    .* :*   *:::*    *     :  .  :    ***** *****

AT1G52830.1     GDVPWQMFKESCKRLRIVKRSDATGFGLQQD------------
gm038311_Glyma1 GDVPWEMFIESCKRLRIMKRSDAKGFDLQPKGSLKGFIEGVTK
gm040797_Glyma1 GDVPWEMFIESCKRLRIMKRSDAKGFDLQPKGSLKGFIEGVTK
gm017314_Glyma0 GDVPWEMFMESCKRLRIMKRSDAKGFGLQPKGSLKGFIESAAK
gm055370_Glyma2 GDVPWDMFVTSCRRLRIMKGSEARGLGCAV-------------
gm004012_Glyma0 GDVPWNMFVSSCKRLRIMKGSEAKGLGCF--------------
                *****:**  **:****:* *:* *:.
BoxShade v3.31 C (beta, 970507) Output
AT1G52830.1     - - - - - - M A K E G L A L E I - T E L R L G L P G D N Y S - E I S V C G S S K K - K K R V L S D M M T S S A - - - - -
gm038311_Glyma1    - - - - - - M E K E A V G L E I T T E L R L G L P G G E - - - - - - L P D K N E K I K K R V F S E I Q - - - - - - - - -
gm040797_Glyma1    - - - - - - M E K E G V G L E I T T E L R L G L P G G E - - - - - - L P D K N E K M K K R V F S E I - - - - - - - - - -
gm017314_Glyma0    - - - - - - M A K E G L G L E I - T E L R L G L P D A E H - - - V T V V N K N E - - K K R A F S Q I - - - - - - - - - -
gm055370_Glyma2    M E N T T V T Y Q T D L N L K A - T E L R L G L P G T E E S E E K T L S A G A R I N N K R P L T E T S - D E C - - - - -
gm004012_Glyma0    M E N S L G K Y G K E L N L E A - T E L R L G L P G S D E P E K R S - - - - A V R S N K R S S P E A S E E E C I S K G N
 
AT1G52830.1     L D T E N E N S V V S S V E D E S L P V V K S Q A V G W P P V C S Y R R - - - - - - K K N N E E A S K A I G Y V K V S M
gm038311_Glyma1    A H D D D E N S - - S S E Q D R K I Q T - K N Q V V G W P P V C S Y R K - - - - - - K N T V N E - T K M - - Y V K V S M
gm040797_Glyma1    - N Q G D E N S - - S S E E D R K I Q T - K N Q V V G W P P V C S Y R K - - - - - - K N T I N E - T K M - - Y V K V S M
gm017314_Glyma0    - - - D D E N S - - S S G G D R K I K T N K S Q V V G W P P V C S Y R K - - - - - - K N S M N E G S K M - - Y V K V S M
gm055370_Glyma2    - - A S N G T S S A P H E K T E T A P P A K T K I V G W P P I R S Y R K N S L Q - - - - - E S E G A G I - - Y V K V S M
gm004012_Glyma0    M N S S D G S D I T S D D Q D N V V P P A K A Q V V G W P P V R S Y R K N S L Q Q K K E E Q A E G A G M - - Y V K V S M
 
AT1G52830.1     D G V P Y M R K I D L G S S N S Y I N L V T V L E N L F G C - L G I G V A - K E G K K C E Y I I I Y E D K D R D W M L V
gm038311_Glyma1    D G A P F L R K I D L A M H K G Y S E L V L A L E K F F G C - Y G I R E A L K D A E N A E H V P I Y E D K D G D W M L V
gm040797_Glyma1    D G A P F L R K I D L A M H K G Y S E L A L A L E K F F G C - Y G I G S A L K D E E N V E Q V P I Y E D K D G D W M L V
gm017314_Glyma0    D G A P F L R K I D L G L H K G Y S D L A L A L D K L F G S - Y G M V E A L K N A D N S E H V P I Y E D K D G D W M L V
gm055370_Glyma2    D G A P Y L R K I D L K V Y G G Y T Q L L K S L E N M F K L T I G E H S E K E G Y K G S D Y A P T Y E D K D G D W M L V
gm004012_Glyma0    E G A P Y L R K I D L K V Y K S Y P E L L K A L E N M F K C T F G Q Y S E R E G Y N G S E Y A P T Y E D K D G D W M L V
 
AT1G52830.1     G D V P W Q M F K E S C K R L R I V K R S D A T G F G L Q Q D - - - - - - - - - - - -
gm038311_Glyma1    G D V P W E M F I E S C K R L R I M K R S D A K G F D L Q P K G S L K G F I E G V T K
gm040797_Glyma1    G D V P W E M F I E S C K R L R I M K R S D A K G F D L Q P K G S L K G F I E G V T K
gm017314_Glyma0    G D V P W E M F M E S C K R L R I M K R S D A K G F G L Q P K G S L K G F I E S A A K
gm055370_Glyma2    G D V P W D M F V T S C R R L R I M K G S E A R G L G C A V - - - - - - - - - - - - -
gm004012_Glyma0    G D V P W N M F V S S C K R L R I M K G S E A K G L G C F - - - - - - - - - - - - - -
 
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